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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 243.8
Min RPKM: 2.0
Std RPKM: 50.9
Median RPKM: 77.9
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
243.8
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
235.7
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
182.7
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
181.5
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
172.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
158.3
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
156.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
154.3
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
151.4
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
150.8
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
150.4
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
149.7
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
143.5
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
142.5
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
139.3
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
138.7
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
138.3
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
137.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
135.0
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
134.8
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
132.3
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
132.2
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
128.9
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
128.1
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
127.2
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
123.7
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
123.4
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
122.2
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
121.8
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
121.2
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
119.8
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
119.3
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
118.9
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
118.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
118.1
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
115.2
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
113.8
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
109.0
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
107.3
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
106.9
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
105.4
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
104.4
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
104.1
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
101.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
100.7
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
99.7
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
99.0
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
97.9
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
96.4
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
91.5
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
88.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
87.8
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
85.1
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
82.8
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
81.1
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
80.6
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
80.3
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
78.3
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
77.9
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
75.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
75.4
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
71.8
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
70.4
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
70.4
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
70.2
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
69.6
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
67.5
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
67.2
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
66.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
64.2
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
62.9
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
59.3
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
58.0
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
57.9
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
53.2
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
51.4
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
50.6
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
50.4
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
49.9
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
49.8
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
48.6
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
48.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
46.3
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
45.6
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
44.8
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
44.8
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
43.9
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
42.0
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
40.0
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
38.7
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
35.6
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
35.4
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
32.4
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
31.6
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
29.7
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
29.1
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
29.0
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
28.0
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
26.6
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
26.5
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
26.1
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
25.7
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
23.6
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
23.0
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
22.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
20.6
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
18.8
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
14.0
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
13.6
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
12.5
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
10.3
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
8.1
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
6.5
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
4.8
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
3.6
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
3.5
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
2.0
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.