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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 651.6
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 432.3
Min RPKM: 97.6
Std RPKM: 61.0
Median RPKM: 230.8
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
432.3
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
370.0
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
355.4
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
336.0
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
326.8
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
325.4
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
321.9
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
320.3
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
316.0
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
313.1
GTEX-X585-3026-SM-46MWF
50-59 years, male
312.4
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
302.0
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
297.6
GTEX-WL46-2926-SM-3LK82
50-59 years, male
294.5
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
292.1
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
290.1
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
288.6
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
287.5
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
282.7
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
281.1
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
280.9
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
279.9
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
276.8
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
276.5
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
275.3
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
275.1
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
274.8
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
273.8
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
273.2
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
273.0
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
271.7
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
269.9
GTEX-11PRG-2926-SM-5987A
50-59 years, male
268.7
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
268.5
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
267.6
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
265.6
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
263.9
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
263.3
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
262.6
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
262.6
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
249.5
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
246.0
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
244.4
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
243.9
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
243.7
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
241.7
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
239.4
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
238.3
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
236.9
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
236.3
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
235.6
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
235.1
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
233.7
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
233.4
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
232.5
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
232.1
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
230.9
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
230.6
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
229.6
GTEX-1128S-2726-SM-5H12C
60-69 years, female
229.4
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
227.3
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
225.3
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
223.0
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
222.9
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
222.7
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
222.1
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
220.3
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
219.7
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
218.9
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
216.2
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
209.4
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
209.0
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
208.3
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
207.4
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
203.9
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
203.0
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
202.2
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
199.7
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
199.1
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
193.8
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
193.8
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
188.3
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
188.2
GTEX-145MF-2726-SM-5O995
50-59 years, male
188.0
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
187.4
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
180.9
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
180.6
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
180.5
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
175.4
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
171.0
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
167.3
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
164.5
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
164.0
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
161.2
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
161.0
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
159.2
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
159.0
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
158.0
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
157.8
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
153.6
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
153.3
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
146.5
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
146.5
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
146.1
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
145.9
GTEX-144FL-3026-SM-5O99C
50-59 years, male
143.5
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
138.3
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
137.8
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
137.4
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
131.7
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
128.1
GTEX-11GSP-3226-SM-5986O
60-69 years, female
111.2
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
109.7
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
97.6
Show all
Brain - Frontal Cortex (BA9) RPKM: 319.2
Samples: 108
Max RPKM: 556.4
Min RPKM: 70.1
Std RPKM: 107.6
Median RPKM: 340.9
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
556.4
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
536.2
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
524.5
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
511.6
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
502.4
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
499.7
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
486.6
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
483.8
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
469.9
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
464.7
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
457.5
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
448.2
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
441.7
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
433.4
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
427.3
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
425.2
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
425.0
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
417.9
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
416.1
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
413.3
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
398.9
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
395.3
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
392.7
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
392.5
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
392.5
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
392.0
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
389.4
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
389.2
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
386.9
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
386.5
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
382.6
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
381.4
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
379.0
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
378.2
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
371.2
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
370.5
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
367.2
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
366.3
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
366.0
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
365.2
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
364.7
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
364.4
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
364.2
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
363.3
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
363.3
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
361.3
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
357.7
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
354.0
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
349.3
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
348.0
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
346.6
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
344.6
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
341.6
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
341.2
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
340.6
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
340.2
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
333.1
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
328.2
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
324.0
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
321.5
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
307.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
306.9
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
306.7
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
304.4
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
294.3
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
293.4
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
291.4
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
290.8
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
288.6
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
284.1
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
279.7
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
276.0
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
274.9
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
272.5
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
271.0
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
270.5
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
256.7
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
256.6
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
253.4
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
246.1
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
241.6
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
238.6
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
231.3
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
229.6
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
227.5
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
224.9
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
222.8
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
221.6
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
210.5
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
210.0
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
197.2
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
190.0
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
188.6
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
182.0
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
180.6
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
180.1
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
167.7
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
164.4
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
143.2
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
140.8
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
136.9
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
136.1
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
134.5
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
115.3
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
111.9
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
109.5
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
106.4
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
70.1
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.