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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 535.0
Min RPKM: 39.2
Std RPKM: 82.0
Median RPKM: 197.2
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
535.0
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
355.3
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
354.6
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
341.8
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
329.6
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
328.8
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
328.1
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
321.7
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
308.0
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
307.8
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
302.7
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
300.5
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
296.6
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
287.4
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
285.9
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
285.2
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
280.3
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
277.4
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
273.6
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
272.7
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
270.4
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
268.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
266.9
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
265.6
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
262.6
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
261.0
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
260.6
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
257.8
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
254.9
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
252.3
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
251.4
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
250.9
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
246.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
246.4
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
244.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
244.3
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
241.0
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
240.5
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
237.3
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
236.4
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
235.4
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
231.1
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
226.9
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
226.5
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
225.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
222.9
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
221.7
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
220.8
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
218.3
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
216.7
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
216.0
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
215.3
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
211.9
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
209.8
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
209.3
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
208.8
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
206.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
202.1
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
197.2
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
197.0
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
196.4
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
195.7
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
195.7
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
192.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
189.1
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
184.3
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
182.4
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
175.0
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
174.6
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
171.2
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
170.4
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
166.8
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
161.8
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
161.8
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
160.4
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
159.1
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
158.3
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
157.8
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
154.9
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
153.5
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
151.4
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
149.8
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
149.2
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
148.8
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
147.2
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
146.4
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
145.2
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
140.9
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
139.4
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
139.3
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
138.2
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
136.1
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
127.4
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
123.8
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
123.0
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
118.8
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
115.7
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
115.7
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
113.8
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
109.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
100.6
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
94.2
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
93.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
92.6
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
91.6
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
87.2
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
78.8
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
78.1
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
77.0
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
73.4
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
69.4
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
67.8
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
67.6
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
67.0
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
57.4
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
44.3
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
39.2
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.