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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 138.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 338.3
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 384.4
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 328.6
Min RPKM: 81.4
Std RPKM: 41.1
Median RPKM: 173.8
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
328.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
292.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
290.8
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
267.7
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
260.8
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
259.7
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
258.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
258.0
GTEX-QEL4-2126-SM-447AE
50-59 years, male
251.2
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
246.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
241.3
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
236.5
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
236.0
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
236.0
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
236.0
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
235.9
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
232.1
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
231.9
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
231.1
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
229.0
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
228.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
228.1
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
227.2
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
227.0
GTEX-RU72-0626-SM-46MUI
50-59 years, female
226.9
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
225.8
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
224.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
224.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
222.2
GTEX-11EI6-0626-SM-5985T
60-69 years, male
220.0
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
219.4
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
219.2
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
218.8
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
218.6
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
217.6
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
216.9
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
216.8
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
214.0
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
213.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
213.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
212.8
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
212.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
211.6
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
211.5
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
211.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
211.2
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
210.5
GTEX-1192X-2326-SM-5987X
50-59 years, male
210.2
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
208.4
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
208.4
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
207.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
206.9
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
206.2
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
205.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
205.0
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
204.8
GTEX-XBED-1626-SM-47JYN
60-69 years, male
202.1
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
201.7
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
201.2
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
200.2
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
198.0
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
197.9
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
196.3
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
195.1
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
193.4
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
192.8
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
192.8
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
192.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
191.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
191.0
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
190.7
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
189.4
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
189.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
188.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
187.7
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
187.7
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
187.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
186.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
185.4
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
184.8
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
184.8
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
184.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
183.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
183.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
182.5
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
182.1
GTEX-13113-1726-SM-5GCOO
60-69 years, female
181.7
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
181.5
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
181.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
181.2
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
181.2
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
181.0
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
179.1
GTEX-14753-2426-SM-5LU8U
60-69 years, male
178.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
178.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
178.4
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
178.1
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
177.6
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
177.4
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
177.0
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
176.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
175.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
175.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
175.2
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
174.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
174.0
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
174.0
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
173.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
170.6
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
169.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
169.8
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
169.5
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
169.1
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
168.1
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
167.9
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
167.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
167.1
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
166.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
166.4
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
165.5
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
163.5
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
163.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
162.5
GTEX-R55D-0826-SM-48FEA
50-59 years, male
162.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
162.4
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
162.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
162.1
GTEX-1122O-1226-SM-5H113
60-69 years, female
161.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
161.5
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
161.5
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
161.3
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
161.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
161.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
160.6
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
160.4
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
160.3
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
159.1
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
158.9
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
158.6
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
157.6
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
157.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
157.5
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
157.0
GTEX-REY6-2426-SM-48FF5
60-69 years, male
156.8
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
156.3
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
156.2
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
156.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
155.1
GTEX-QVJO-1826-SM-447C9
60-69 years, female
155.1
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
154.8
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
154.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
154.0
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
153.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
151.9
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
150.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
149.3
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
148.8
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
148.2
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
148.1
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
147.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
147.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
147.2
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
147.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
146.9
GTEX-T6MN-0726-SM-32PML
50-59 years, male
146.1
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
145.7
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
144.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
144.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
144.0
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
144.0
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
143.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
142.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
141.0
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
140.9
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
140.8
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
139.9
GTEX-WFON-1826-SM-3GILG
40-49 years, male
138.9
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
137.8
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
137.1
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
135.6
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
134.9
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
134.9
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
134.8
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
134.6
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
134.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
133.3
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
133.3
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
132.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
132.3
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
129.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
129.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
127.7
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
127.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
126.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
126.0
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
125.0
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
123.8
GTEX-11P82-1326-SM-5HL62
20-29 years, male
120.8
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
120.6
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
120.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
113.8
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
112.7
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
111.6
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
110.6
GTEX-144GM-0926-SM-5O994
20-29 years, male
109.9
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
105.7
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
101.4
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
101.2
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
95.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
94.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
93.1
GTEX-117XS-1926-SM-5GICO
60-69 years, male
87.4
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
84.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
81.4
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.