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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 18.6
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 48.8
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 53.6
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 129.5
Min RPKM: 0.6
Std RPKM: 21.1
Median RPKM: 17.8
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
129.5
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
84.2
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
80.7
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
79.6
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
78.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
78.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
77.1
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
74.0
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
67.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
63.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
62.9
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
61.1
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
60.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
58.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
57.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
57.7
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
55.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
54.7
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
54.1
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
53.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
53.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
52.2
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
50.5
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
50.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
48.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
47.9
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
47.6
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
46.8
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
45.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
44.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
44.6
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
44.3
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
44.2
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
44.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
43.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
43.7
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
43.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
42.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
42.2
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
42.1
GTEX-13113-1726-SM-5GCOO
60-69 years, female
41.1
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
40.8
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
40.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
40.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
40.0
GTEX-111YS-1926-SM-5GICC
60-69 years, male
39.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
39.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
39.9
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
39.6
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
39.4
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
39.1
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
38.8
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
38.8
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
38.2
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
38.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
38.1
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
38.0
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
37.7
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
37.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
37.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
36.1
GTEX-11P81-1926-SM-5BC53
30-39 years, female
35.8
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
34.2
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
34.2
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
34.0
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
33.6
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
32.5
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
32.2
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
31.9
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
31.3
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
31.3
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
31.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
30.8
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
30.5
GTEX-TML8-1226-SM-32QON
40-49 years, female
30.4
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
30.0
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
29.7
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
29.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
28.9
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
28.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
28.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
27.9
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
27.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
27.7
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
27.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
27.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
27.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
26.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
26.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
25.8
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
25.6
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
25.1
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
24.8
GTEX-1122O-1226-SM-5H113
60-69 years, female
24.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
23.7
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
23.2
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
22.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
22.1
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
21.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
20.0
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
19.9
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
19.8
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
19.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
18.8
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
18.4
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
18.3
GTEX-QEL4-2126-SM-447AE
50-59 years, male
17.9
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
17.7
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
17.5
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
17.1
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
16.6
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
16.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
15.6
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
15.5
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
14.8
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
14.8
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
14.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
14.6
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
14.6
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
14.4
GTEX-T6MN-0726-SM-32PML
50-59 years, male
14.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
14.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
13.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
12.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
12.5
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
12.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
11.8
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
11.8
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
11.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
11.4
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
11.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
10.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
10.5
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
10.3
GTEX-QVJO-1826-SM-447C9
60-69 years, female
9.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
9.8
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
9.6
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
9.3
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
9.2
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
9.2
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
8.9
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
8.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
8.6
GTEX-WFON-1826-SM-3GILG
40-49 years, male
8.6
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
8.5
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
8.4
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
7.8
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
7.6
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
7.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
7.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
7.2
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
7.0
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
6.9
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
6.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
6.7
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
6.4
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
6.4
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
6.3
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
6.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
6.1
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
6.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
6.0
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
5.9
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
5.8
GTEX-117YX-1426-SM-5H12H
50-59 years, male
5.7
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
5.7
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
5.7
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
5.6
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
5.6
GTEX-14753-2426-SM-5LU8U
60-69 years, male
5.0
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
5.0
GTEX-R55D-0826-SM-48FEA
50-59 years, male
4.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
4.7
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
4.6
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
4.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
4.6
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
4.4
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
4.2
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
4.2
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
4.2
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
4.1
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
4.0
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
3.9
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
3.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
3.9
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
3.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
3.7
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
3.7
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
3.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
3.4
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
3.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
3.2
GTEX-11OF3-1926-SM-59889
60-69 years, male
3.0
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
3.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
2.9
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
2.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
2.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
2.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
2.7
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
2.4
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
2.3
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
2.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
2.2
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
2.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
2.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
1.9
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
1.9
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
1.7
GTEX-144GM-0926-SM-5O994
20-29 years, male
1.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
1.2
GTEX-REY6-2426-SM-48FF5
60-69 years, male
1.0
GTEX-11P82-1326-SM-5HL62
20-29 years, male
0.8
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
0.7
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
0.6
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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