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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 286.2
Min RPKM: 9.2
Std RPKM: 57.2
Median RPKM: 119.2
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
286.2
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
267.0
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
255.6
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
250.0
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
249.2
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
244.1
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
237.0
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
236.4
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
223.8
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
208.7
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
204.1
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
201.3
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
198.8
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
189.3
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
186.4
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
182.2
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
178.4
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
175.7
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
175.5
GTEX-QLQW-0126-SM-447BK
30-39 years, male
173.9
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
173.7
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
173.1
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
170.2
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
164.2
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
162.6
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
162.6
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
157.8
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
157.0
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
155.0
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
151.0
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
145.8
GTEX-144GN-2126-SM-5O99D
50-59 years, male
144.3
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
142.3
GTEX-QCQG-0226-SM-48U28
50-59 years, female
141.6
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
141.2
GTEX-QV31-0126-SM-447BP
30-39 years, male
141.0
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
138.9
GTEX-R55G-0226-SM-48FEI
40-49 years, female
137.9
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
135.4
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
135.3
GTEX-PX3G-0926-SM-48U12
20-29 years, female
132.4
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
132.4
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
132.4
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
131.4
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
130.2
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
129.1
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
128.1
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
128.0
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
126.6
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
124.6
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
120.9
GTEX-13111-0126-SM-5EGHO
50-59 years, male
120.0
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
118.3
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
116.0
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
115.6
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
115.5
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
114.5
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
110.4
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
110.0
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
109.8
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
104.3
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
100.1
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
100.1
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
99.8
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
99.1
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
98.9
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
98.4
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
97.9
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
97.8
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
95.1
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
93.0
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
92.3
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
91.3
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
91.0
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
89.9
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
86.9
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
83.1
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
78.5
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
78.1
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
75.7
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
73.2
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
73.1
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
72.4
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
71.1
GTEX-X585-1826-SM-4QAS3
50-59 years, male
70.8
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
70.2
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
70.1
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
68.8
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
68.5
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
65.1
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
64.0
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
63.8
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
63.7
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
60.3
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
58.7
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
58.1
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
57.3
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
54.5
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
54.2
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
52.5
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
46.5
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
36.9
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
30.5
GTEX-Q734-0226-SM-48U1A
40-49 years, female
9.2
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.