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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1427.5
Min RPKM: 508.5
Std RPKM: 205.1
Median RPKM: 861.4
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
1427.5
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
1380.5
GTEX-RU72-2226-SM-46MUE
50-59 years, female
1319.0
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
1308.3
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
1296.3
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
1285.7
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
1269.6
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
1235.3
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
1204.1
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
1179.7
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
1177.2
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
1172.3
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
1113.2
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
1099.1
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
1098.8
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
1094.6
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
1088.0
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
1080.2
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
1056.1
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
1037.7
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
1024.9
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
1023.8
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
1022.6
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
1018.1
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
1017.7
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
1015.9
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
1000.8
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
992.8
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
985.8
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
983.9
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
962.2
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
958.8
GTEX-P78B-1926-SM-3P616
40-49 years, female
956.4
GTEX-11I78-1926-SM-59878
50-59 years, female
951.1
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
950.8
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
930.7
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
928.7
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
927.1
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
916.4
GTEX-S32W-1226-SM-4AD67
50-59 years, female
916.2
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
908.5
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
907.2
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
896.2
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
880.9
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
880.6
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
874.0
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
873.6
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
865.7
GTEX-S341-0726-SM-4AD5R
40-49 years, female
861.4
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
860.7
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
843.4
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
840.0
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
824.7
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
822.2
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
820.0
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
811.7
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
809.7
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
806.5
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
805.7
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
803.1
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
796.4
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
795.3
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
791.7
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
790.4
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
790.4
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
787.8
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
784.3
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
773.7
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
767.6
GTEX-QCQG-1426-SM-48U22
50-59 years, female
763.1
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
751.7
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
747.1
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
742.6
GTEX-Q734-0726-SM-48TZP
40-49 years, female
735.6
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
734.4
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
732.9
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
724.2
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
707.0
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
685.4
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
678.5
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
677.9
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
675.0
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
667.2
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
664.5
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
662.8
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
648.7
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
644.1
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
640.4
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
627.8
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
626.2
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
620.0
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
580.7
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
579.7
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
573.6
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
536.7
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
511.7
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
508.5
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.