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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 289.5
Min RPKM: 64.9
Std RPKM: 48.8
Median RPKM: 158.2
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
289.5
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
280.8
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
266.5
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
265.2
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
263.5
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
263.5
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
260.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
260.2
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
249.8
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
244.0
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
237.6
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
234.6
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
231.6
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
230.5
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
229.6
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
229.0
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
228.9
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
212.3
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
211.2
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
208.4
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
202.4
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
201.9
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
199.7
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
198.4
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
197.3
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
196.3
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
195.8
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
195.2
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
192.7
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
192.1
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
191.4
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
190.8
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
189.8
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
189.0
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
188.3
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
187.9
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
187.3
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
187.2
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
185.0
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
182.6
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
181.9
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
181.1
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
176.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
172.7
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
171.5
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
170.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
170.2
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
169.3
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
168.5
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
166.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
166.6
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
166.0
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
164.3
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
164.1
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
162.4
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
161.7
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
161.2
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
160.3
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
158.2
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
158.0
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
157.8
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
154.9
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
153.8
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
152.6
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
151.9
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
151.9
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
151.8
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
145.8
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
144.4
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
143.0
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
140.9
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
140.9
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
140.7
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
140.0
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
139.8
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
139.7
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
138.6
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
135.2
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
135.0
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
134.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
134.7
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
134.1
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
133.7
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
132.0
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
129.5
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
128.1
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
127.4
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
126.5
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
125.5
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
125.4
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
124.8
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
123.0
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
122.4
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
121.4
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
121.0
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
119.5
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
118.7
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
117.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
117.4
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
115.8
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
112.2
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
110.2
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
109.6
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
109.2
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
108.7
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
105.7
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
105.2
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
105.2
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
104.9
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
96.2
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
93.0
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
89.8
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
87.6
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
85.0
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
83.0
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
73.9
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
64.9
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.