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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 9773.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 10236.2
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 17537
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 884.0
Min RPKM: 368.0
Std RPKM: 103.8
Median RPKM: 544.5
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
884.0
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
856.2
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
829.1
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
798.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
781.4
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
767.6
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
767.4
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
765.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
760.0
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
757.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
746.6
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
737.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
734.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
732.2
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
728.9
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
726.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
716.8
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
716.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
710.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
709.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
707.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
705.2
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
702.4
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
692.2
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
691.6
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
688.4
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
680.4
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
680.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
675.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
675.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
671.3
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
662.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
658.4
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
657.2
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
656.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
655.6
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
654.3
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
654.2
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
651.9
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
650.5
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
647.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
643.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
643.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
641.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
641.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
641.0
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
635.6
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
627.5
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
626.9
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
624.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
623.6
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
622.4
GTEX-13113-1726-SM-5GCOO
60-69 years, female
620.7
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
618.9
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
618.1
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
616.5
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
615.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
612.8
GTEX-11OF3-1926-SM-59889
60-69 years, male
607.1
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
606.8
GTEX-117YX-1426-SM-5H12H
50-59 years, male
604.9
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
604.3
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
601.3
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
599.3
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
597.1
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
596.2
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
596.1
GTEX-11EI6-0626-SM-5985T
60-69 years, male
595.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
592.9
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
592.8
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
591.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
590.6
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
588.2
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
584.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
582.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
582.4
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
582.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
581.9
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
581.6
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
578.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
576.7
GTEX-11P81-1926-SM-5BC53
30-39 years, female
575.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
573.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
571.5
GTEX-14753-2426-SM-5LU8U
60-69 years, male
570.1
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
568.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
567.9
GTEX-RU72-0626-SM-46MUI
50-59 years, female
567.1
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
563.5
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
563.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
562.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
557.0
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
556.5
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
556.5
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
556.1
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
556.0
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
554.6
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
552.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
552.7
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
550.8
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
550.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
549.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
549.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
548.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
548.0
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
547.4
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
547.0
GTEX-TML8-1226-SM-32QON
40-49 years, female
542.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
541.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
541.5
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
540.9
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
540.9
GTEX-QEL4-2126-SM-447AE
50-59 years, male
540.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
540.5
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
540.4
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
536.1
GTEX-S341-1526-SM-4AD6K
40-49 years, female
532.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
532.4
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
530.1
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
530.0
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
526.4
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
525.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
525.4
GTEX-111YS-1926-SM-5GICC
60-69 years, male
525.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
524.4
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
524.4
GTEX-REY6-2426-SM-48FF5
60-69 years, male
521.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
520.6
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
518.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
517.1
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
515.6
GTEX-11P82-1326-SM-5HL62
20-29 years, male
514.7
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
511.7
GTEX-R53T-1526-SM-48FEK
50-59 years, female
511.4
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
507.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
506.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
504.0
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
503.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
501.3
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
501.0
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
499.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
498.0
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
497.1
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
496.9
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
496.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
494.0
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
493.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
491.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
491.6
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
491.6
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
490.5
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
489.6
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
487.6
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
486.9
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
486.7
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
485.9
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
485.5
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
485.0
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
483.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
483.7
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
475.5
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
475.4
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
475.4
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
471.7
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
470.4
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
469.4
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
466.2
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
465.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
462.3
GTEX-QVJO-1826-SM-447C9
60-69 years, female
461.7
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
460.4
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
458.2
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
454.5
GTEX-144GM-0926-SM-5O994
20-29 years, male
454.3
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
453.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
453.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
453.1
GTEX-T6MN-0726-SM-32PML
50-59 years, male
452.2
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
452.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
451.8
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
451.1
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
449.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
443.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
442.4
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
442.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
440.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
437.6
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
436.5
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
434.0
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
431.6
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
430.0
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
427.9
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
422.3
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
421.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
417.8
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
417.5
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
416.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
416.5
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
411.9
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
409.6
GTEX-R55D-0826-SM-48FEA
50-59 years, male
407.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
407.2
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
403.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
402.8
GTEX-117XS-1926-SM-5GICO
60-69 years, male
399.5
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
397.4
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
393.3
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
393.2
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
389.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
387.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
382.1
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
375.4
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
373.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
368.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.