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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 3220.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 2810.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 4962.8
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 589.3
Min RPKM: 92.6
Std RPKM: 56.8
Median RPKM: 176.0
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
589.3
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
434.5
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
369.9
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
332.7
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
312.9
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
308.5
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
305.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
303.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
302.7
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
289.2
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
281.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
280.6
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
269.8
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
268.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
267.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
265.8
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
260.7
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
259.5
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
255.5
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
254.6
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
247.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
244.8
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
241.5
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
235.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
229.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
228.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
226.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
223.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
221.9
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
221.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
221.2
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
220.7
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
220.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
220.4
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
219.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
219.7
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
217.0
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
216.6
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
216.4
GTEX-1192X-2326-SM-5987X
50-59 years, male
216.2
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
215.4
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
213.1
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
212.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
212.2
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
212.0
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
211.1
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
211.1
GTEX-QEL4-2126-SM-447AE
50-59 years, male
209.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
207.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
207.6
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
206.8
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
206.8
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
205.5
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
203.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
203.1
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
202.5
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
201.3
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
199.8
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
199.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
198.6
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
198.5
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
198.3
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
198.1
GTEX-13113-1726-SM-5GCOO
60-69 years, female
196.1
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
196.0
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
195.8
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
195.4
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
195.0
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
194.5
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
193.6
GTEX-RU72-0626-SM-46MUI
50-59 years, female
193.1
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
193.0
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
192.6
GTEX-11EI6-0626-SM-5985T
60-69 years, male
192.0
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
191.9
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
191.5
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
190.3
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
190.0
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
189.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
189.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
188.7
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
188.6
GTEX-11P82-1326-SM-5HL62
20-29 years, male
188.3
GTEX-11P81-1926-SM-5BC53
30-39 years, female
188.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
187.2
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
186.4
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
185.8
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
185.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
185.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
185.2
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
185.1
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
183.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
183.2
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
183.0
GTEX-S341-1526-SM-4AD6K
40-49 years, female
181.6
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
180.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
180.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
180.0
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
180.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
179.8
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
178.8
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
177.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
177.4
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
177.3
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
177.0
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
176.7
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
176.2
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
175.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
174.9
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
174.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
172.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
172.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
171.2
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
170.7
GTEX-1122O-1226-SM-5H113
60-69 years, female
170.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
170.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
169.7
GTEX-117YX-1426-SM-5H12H
50-59 years, male
168.2
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
167.8
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
167.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
167.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
167.0
GTEX-111YS-1926-SM-5GICC
60-69 years, male
166.1
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
165.8
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
165.7
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
164.6
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
164.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
163.1
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
162.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
162.2
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
161.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
160.9
GTEX-X261-0626-SM-3NMD9
50-59 years, male
160.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
160.5
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
159.6
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
159.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
159.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
159.2
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
158.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
158.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
158.3
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
157.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
157.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
156.1
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
155.7
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
155.6
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
155.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
155.4
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
154.4
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
153.3
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
153.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
152.7
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
152.4
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
152.4
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
152.0
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
151.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
151.4
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
151.1
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
150.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
150.6
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
150.2
GTEX-T6MN-0726-SM-32PML
50-59 years, male
148.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
148.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
148.4
GTEX-144GM-0926-SM-5O994
20-29 years, male
147.6
GTEX-WFON-1826-SM-3GILG
40-49 years, male
147.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
145.7
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
144.9
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
144.3
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
141.7
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
140.6
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
140.3
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
140.3
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
139.9
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
138.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
138.9
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
138.7
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
135.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
135.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
134.7
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
133.5
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
133.5
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
132.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
132.6
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
132.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
132.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
131.8
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
130.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
130.2
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
129.8
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
129.1
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
129.0
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
128.9
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
128.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
127.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
126.0
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
125.7
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
125.1
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
122.4
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
122.1
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
119.6
GTEX-REY6-2426-SM-48FF5
60-69 years, male
118.7
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
118.0
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
117.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
115.8
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
112.9
GTEX-R55D-0826-SM-48FEA
50-59 years, male
109.6
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
108.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
107.7
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
107.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
105.7
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
102.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
102.3
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
92.6
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.