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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 448.9
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 257.8
Min RPKM: 70.9
Std RPKM: 34.1
Median RPKM: 177.9
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
257.8
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
235.3
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
234.4
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
233.8
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
230.5
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
228.8
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
227.3
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
224.9
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
222.8
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
221.2
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
217.8
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
216.7
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
216.2
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
214.8
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
212.9
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
211.9
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
211.4
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
210.7
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
207.6
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
207.4
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
207.3
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
206.6
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
206.2
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
205.4
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
204.8
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
203.7
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
202.3
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
201.6
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
201.5
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
201.1
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
199.2
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
197.8
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
197.8
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
197.6
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
197.5
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
197.5
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
197.2
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
197.0
GTEX-11GSP-3226-SM-5986O
60-69 years, female
196.6
GTEX-145MF-2726-SM-5O995
50-59 years, male
194.5
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
193.5
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
191.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
189.9
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
189.7
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
189.0
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
187.7
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
186.9
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
181.8
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
181.6
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
181.1
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
180.9
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
179.9
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
179.8
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
179.1
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
178.4
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
178.1
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
178.0
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
177.7
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
177.3
GTEX-11PRG-2926-SM-5987A
50-59 years, male
176.2
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
175.4
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
174.9
GTEX-1128S-2726-SM-5H12C
60-69 years, female
174.8
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
174.5
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
173.2
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
173.1
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
173.1
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
172.1
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
171.5
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
170.6
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
169.8
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
169.1
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
169.1
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
168.7
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
168.5
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
168.5
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
168.3
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
166.7
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
166.5
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
162.1
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
161.2
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
159.9
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
158.9
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
157.6
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
154.7
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
154.7
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
153.9
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
152.1
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
151.7
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
151.7
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
151.3
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
150.1
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
150.0
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
148.2
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
147.5
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
147.1
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
146.5
GTEX-WL46-2926-SM-3LK82
50-59 years, male
145.5
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
144.1
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
143.2
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
141.1
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
140.4
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
138.3
GTEX-144FL-3026-SM-5O99C
50-59 years, male
135.8
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
134.3
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
134.2
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
133.1
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
117.0
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
110.4
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
96.6
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
96.0
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
91.3
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
73.8
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
70.9
Show all
Brain - Frontal Cortex (BA9) RPKM: 258.4
Samples: 108
Max RPKM: 433.9
Min RPKM: 109.8
Std RPKM: 53.4
Median RPKM: 260.0
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
433.9
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
380.8
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
369.5
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
345.5
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
336.3
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
334.5
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
331.5
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
327.5
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
317.5
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
314.7
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
311.2
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
310.5
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
310.1
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
309.9
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
307.1
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
304.9
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
303.4
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
300.9
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
299.9
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
298.0
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
294.1
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
293.6
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
292.2
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
292.0
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
291.5
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
291.3
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
290.3
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
290.2
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
289.6
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
289.3
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
289.2
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
288.9
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
287.6
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
287.4
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
287.0
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
284.7
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
284.5
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
284.5
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
284.4
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
281.2
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
278.1
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
276.5
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
276.3
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
275.7
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
275.6
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
274.3
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
274.2
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
271.9
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
268.8
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
268.1
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
265.6
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
261.6
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
260.6
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
260.2
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
259.8
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
259.7
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
259.4
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
258.5
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
258.4
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
258.0
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
257.1
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
255.8
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
255.3
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
255.0
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
255.0
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
254.5
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
252.8
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
252.4
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
250.5
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
250.4
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
245.4
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
245.0
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
243.6
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
241.7
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
240.5
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
238.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
236.6
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
234.8
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
234.6
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
232.4
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
231.1
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
228.0
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
225.2
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
221.6
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
221.1
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
220.0
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
219.8
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
215.2
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
214.8
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
213.6
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
209.9
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
208.5
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
203.8
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
200.8
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
197.1
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
192.2
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
190.9
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
187.5
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
185.2
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
179.7
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
178.3
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
177.2
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
160.1
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
151.2
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
139.8
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
115.8
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
113.4
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
109.8
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.