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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 533.9
Min RPKM: 33.4
Std RPKM: 84.6
Median RPKM: 172.6
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
533.9
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
452.0
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
416.1
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
341.1
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
331.6
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
317.4
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
292.9
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
286.8
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
284.4
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
281.6
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
278.9
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
275.0
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
271.0
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
261.6
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
258.7
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
257.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
253.5
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
250.5
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
250.1
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
246.5
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
245.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
239.4
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
239.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
238.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
237.7
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
236.7
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
234.8
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
231.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
229.3
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
227.3
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
226.3
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
225.4
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
223.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
219.3
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
215.4
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
212.7
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
208.2
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
205.7
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
205.2
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
202.7
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
200.9
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
200.1
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
199.2
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
198.1
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
197.0
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
195.7
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
194.1
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
193.4
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
193.4
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
192.7
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
189.4
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
187.6
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
186.6
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
186.1
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
178.0
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
177.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
175.3
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
174.7
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
172.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
172.2
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
170.9
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
169.2
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
167.9
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
166.3
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
164.5
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
162.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
161.8
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
159.5
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
156.9
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
156.2
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
154.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
154.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
152.5
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
148.6
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
148.6
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
147.5
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
145.8
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
143.1
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
141.0
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
140.3
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
140.2
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
139.3
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
138.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
136.7
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
136.3
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
134.8
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
131.6
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
131.3
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
130.0
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
128.1
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
123.8
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
113.6
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
113.3
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
105.4
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
104.8
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
104.6
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
103.2
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
95.4
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
87.7
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
84.5
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
82.6
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
77.2
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
73.6
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
70.5
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
63.5
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
61.3
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
61.3
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
60.2
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
59.2
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
54.6
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
52.4
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
48.3
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
47.8
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
40.0
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
39.9
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
33.6
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
33.4
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.