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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1273.6
Min RPKM: 29.0
Std RPKM: 225.9
Median RPKM: 257.2
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
1273.6
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
973.2
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
897.4
GTEX-11I78-1926-SM-59878
50-59 years, female
708.5
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
690.5
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
687.4
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
680.0
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
677.8
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
667.6
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
658.5
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
640.5
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
640.0
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
634.8
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
605.2
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
594.8
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
563.5
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
544.5
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
507.0
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
503.3
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
495.7
GTEX-QCQG-1426-SM-48U22
50-59 years, female
492.0
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
460.6
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
436.0
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
420.7
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
409.8
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
409.6
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
399.1
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
396.5
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
395.4
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
391.1
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
385.3
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
378.9
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
372.9
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
369.4
GTEX-S32W-1226-SM-4AD67
50-59 years, female
367.5
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
362.4
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
361.3
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
359.0
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
335.7
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
326.5
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
323.0
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
318.1
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
315.8
GTEX-S341-0726-SM-4AD5R
40-49 years, female
279.7
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
272.5
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
264.4
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
263.8
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
263.3
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
257.2
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
255.7
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
236.1
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
230.7
GTEX-RU72-2226-SM-46MUE
50-59 years, female
224.8
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
220.9
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
214.8
GTEX-Q734-0726-SM-48TZP
40-49 years, female
213.2
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
208.7
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
208.0
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
203.8
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
203.5
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
195.7
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
194.0
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
188.3
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
187.8
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
185.4
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
177.8
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
177.2
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
169.2
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
167.0
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
166.7
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
166.7
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
157.0
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
154.0
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
149.4
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
146.1
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
143.5
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
143.2
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
142.8
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
142.6
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
138.1
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
132.9
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
122.9
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
120.7
GTEX-P78B-1926-SM-3P616
40-49 years, female
119.0
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
112.0
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
110.5
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
101.1
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
87.4
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
86.6
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
76.7
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
73.8
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
69.7
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
61.3
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
58.6
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
54.8
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
50.1
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
29.0
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.