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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 898.8
Min RPKM: 33.0
Std RPKM: 210.0
Median RPKM: 241.3
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
898.8
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
845.8
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
801.2
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
781.2
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
716.4
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
713.0
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
682.6
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
667.0
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
592.0
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
584.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
519.8
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
514.5
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
511.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
495.5
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
491.0
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
487.6
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
478.5
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
460.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
446.6
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
444.1
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
433.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
432.6
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
431.5
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
431.0
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
430.4
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
421.0
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
416.5
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
403.5
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
392.2
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
390.3
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
388.3
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
384.7
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
383.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
369.0
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
355.4
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
354.0
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
347.3
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
334.9
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
326.7
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
322.3
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
308.0
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
295.0
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
294.6
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
292.3
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
285.4
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
278.5
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
243.7
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
239.0
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
236.0
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
229.1
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
229.0
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
223.9
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
218.0
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
202.4
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
197.5
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
196.4
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
191.5
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
190.8
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
188.8
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
178.1
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
171.6
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
170.1
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
152.1
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
126.4
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
119.5
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
115.7
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
111.3
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
111.1
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
110.9
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
110.8
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
104.7
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
102.5
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
101.2
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
96.8
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
88.3
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
84.1
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
83.2
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
83.2
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
78.9
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
78.7
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
78.6
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
65.1
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
63.6
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
63.0
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
60.0
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
59.8
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
57.1
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
56.4
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
53.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
52.2
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
46.7
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
42.6
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
38.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
33.0
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.