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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 1024.1
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 741.0
Min RPKM: 115.7
Std RPKM: 159.3
Median RPKM: 496.5
GTEX-WL46-2926-SM-3LK82
50-59 years, male
741.0
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
734.0
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
723.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
721.4
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
704.5
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
702.3
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
700.6
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
683.2
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
682.2
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
669.6
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
650.1
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
640.9
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
634.7
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
633.9
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
633.3
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
625.1
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
623.5
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
623.3
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
616.1
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
613.8
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
612.1
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
611.4
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
607.1
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
604.3
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
596.3
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
591.1
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
580.1
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
573.2
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
568.9
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
565.5
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
562.9
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
560.9
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
558.0
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
554.6
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
554.5
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
554.5
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
553.2
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
548.8
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
548.4
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
548.3
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
546.3
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
545.0
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
544.1
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
540.4
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
538.8
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
536.8
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
531.2
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
530.4
GTEX-11PRG-2926-SM-5987A
50-59 years, male
527.7
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
525.9
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
524.1
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
523.3
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
522.4
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
521.3
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
511.7
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
504.6
GTEX-145MF-2726-SM-5O995
50-59 years, male
498.6
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
494.4
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
487.8
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
477.9
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
474.0
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
471.9
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
471.6
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
463.0
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
459.8
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
452.9
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
443.6
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
441.2
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
434.7
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
432.5
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
430.6
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
429.3
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
427.2
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
421.1
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
420.9
GTEX-1128S-2726-SM-5H12C
60-69 years, female
420.6
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
418.4
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
416.5
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
400.2
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
384.6
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
374.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
370.8
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
366.4
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
362.7
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
354.6
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
347.2
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
345.7
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
342.3
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
334.4
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
281.8
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
276.0
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
275.9
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
270.3
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
265.5
GTEX-144FL-3026-SM-5O99C
50-59 years, male
262.9
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
261.0
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
260.5
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
254.5
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
246.4
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
235.0
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
230.9
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
225.6
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
220.4
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
212.6
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
207.8
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
205.6
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
184.3
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
170.6
GTEX-11GSP-3226-SM-5986O
60-69 years, female
168.4
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
165.1
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
165.1
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
158.6
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
124.3
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
115.7
Show all
Brain - Frontal Cortex (BA9) RPKM: 494.6
Samples: 108
Max RPKM: 885.3
Min RPKM: 75.6
Std RPKM: 214.4
Median RPKM: 532.2
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
885.3
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
883.0
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
872.5
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
847.7
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
842.3
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
800.5
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
771.4
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
770.1
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
760.2
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
755.4
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
752.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
746.2
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
739.0
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
737.2
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
735.6
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
715.7
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
711.5
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
710.4
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
706.6
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
705.8
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
705.3
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
703.7
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
697.1
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
692.8
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
677.6
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
673.2
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
671.2
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
655.7
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
648.4
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
641.6
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
640.7
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
633.1
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
629.0
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
628.7
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
621.0
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
620.8
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
619.9
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
619.7
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
615.5
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
595.3
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
593.4
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
590.4
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
589.1
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
578.8
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
578.6
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
569.8
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
565.1
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
560.7
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
557.8
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
556.2
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
549.2
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
543.1
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
540.4
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
532.4
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
532.0
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
530.8
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
527.9
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
523.2
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
516.6
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
512.0
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
509.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
506.0
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
499.5
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
497.7
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
490.1
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
453.7
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
443.1
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
434.5
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
428.1
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
413.3
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
400.4
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
395.3
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
379.4
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
368.7
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
367.9
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
359.7
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
357.5
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
355.9
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
351.3
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
336.5
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
335.6
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
330.1
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
307.8
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
293.9
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
276.8
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
268.7
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
258.4
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
244.2
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
243.3
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
235.3
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
233.0
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
219.1
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
208.9
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
188.2
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
187.7
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
180.3
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
179.9
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
167.9
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
160.2
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
151.7
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
149.8
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
148.9
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
148.7
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
119.8
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
100.0
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
94.4
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
78.5
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
75.6
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.