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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 526.5
Min RPKM: 19.1
Std RPKM: 121.7
Median RPKM: 220.7
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
526.5
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
478.4
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
471.9
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
457.0
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
435.2
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
419.9
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
416.1
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
409.1
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
407.7
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
381.3
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
378.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
377.3
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
374.0
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
366.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
364.9
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
362.4
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
361.3
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
353.6
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
349.6
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
345.1
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
343.8
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
343.3
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
338.6
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
334.1
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
329.5
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
324.4
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
322.7
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
317.9
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
315.5
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
311.4
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
311.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
306.1
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
302.6
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
301.0
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
298.8
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
298.6
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
297.2
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
293.2
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
286.5
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
286.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
283.1
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
269.4
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
264.8
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
262.7
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
261.0
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
259.5
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
258.6
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
256.0
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
245.6
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
241.8
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
241.0
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
238.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
237.8
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
234.9
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
233.4
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
232.4
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
222.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
221.1
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
220.7
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
216.7
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
216.0
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
210.2
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
208.7
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
201.7
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
198.3
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
196.9
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
196.4
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
195.0
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
193.3
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
189.8
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
178.5
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
177.2
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
177.1
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
175.0
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
168.7
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
162.4
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
147.7
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
147.7
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
142.3
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
140.0
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
136.0
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
132.8
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
127.3
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
126.5
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
126.3
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
123.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
123.3
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
120.9
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
117.3
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
115.1
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
114.5
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
108.2
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
105.7
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
104.6
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
98.2
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
93.2
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
82.7
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
79.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
74.3
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
71.3
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
67.4
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
67.0
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
64.1
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
59.8
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
59.6
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
56.0
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
55.0
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
52.1
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
41.0
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
37.7
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
37.3
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
31.7
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
31.0
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
27.6
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
21.6
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
19.7
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
19.1
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.