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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1104.1
Min RPKM: 19.7
Std RPKM: 267.9
Median RPKM: 304.2
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
1104.1
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
1098.0
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
1068.2
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
942.7
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
911.5
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
892.9
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
879.6
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
849.9
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
708.7
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
695.8
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
622.8
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
610.0
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
607.2
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
602.5
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
602.2
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
579.0
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
577.7
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
557.9
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
557.2
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
518.5
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
517.7
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
516.7
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
507.4
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
502.6
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
500.4
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
500.2
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
492.6
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
482.1
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
480.3
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
479.0
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
476.2
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
470.7
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
449.0
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
436.8
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
400.2
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
390.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
385.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
374.0
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
352.8
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
348.0
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
331.1
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
330.1
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
326.5
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
318.6
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
315.7
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
309.6
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
307.3
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
301.2
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
277.5
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
274.5
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
274.4
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
246.2
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
236.4
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
207.9
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
207.4
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
201.0
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
195.3
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
195.2
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
193.4
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
189.2
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
182.0
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
177.5
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
174.0
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
173.8
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
167.9
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
163.9
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
149.8
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
135.0
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
133.7
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
130.7
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
129.8
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
127.2
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
106.4
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
102.5
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
97.2
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
86.2
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
76.9
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
72.4
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
72.0
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
71.3
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
69.1
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
62.6
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
60.4
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
56.7
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
56.3
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
54.4
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
44.4
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
43.8
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
42.5
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
37.9
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
32.4
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
31.6
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
28.7
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
19.7
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.