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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1719.4
Min RPKM: 61.8
Std RPKM: 398.6
Median RPKM: 687.3
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
1719.4
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
1562.6
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
1535.8
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
1455.8
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
1408.2
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
1394.7
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
1370.9
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
1327.3
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
1273.7
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
1260.1
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
1239.0
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
1196.5
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
1157.3
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
1150.7
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
1147.8
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
1145.3
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
1136.7
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
1134.7
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
1122.1
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
1120.6
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
1107.0
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
1086.3
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
1074.4
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
1062.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
1060.1
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
1058.8
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
1049.1
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
1044.6
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
1036.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
1034.9
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
1000.2
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
997.6
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
995.3
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
983.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
981.5
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
977.4
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
958.7
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
954.9
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
953.7
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
953.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
934.6
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
916.9
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
906.8
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
901.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
884.7
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
878.8
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
874.7
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
841.8
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
839.4
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
818.4
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
811.5
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
808.3
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
766.3
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
765.7
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
751.4
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
743.6
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
717.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
714.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
687.3
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
684.6
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
681.8
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
677.9
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
664.4
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
663.9
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
660.3
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
649.3
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
635.1
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
629.4
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
628.7
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
590.0
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
575.5
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
549.0
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
542.8
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
539.8
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
527.5
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
523.8
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
514.8
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
496.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
491.1
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
481.0
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
444.6
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
436.1
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
426.3
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
416.6
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
413.7
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
399.9
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
397.3
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
364.8
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
356.1
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
329.4
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
315.6
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
311.3
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
301.7
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
297.6
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
279.9
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
254.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
247.6
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
239.3
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
222.8
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
222.5
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
210.9
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
209.3
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
203.4
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
195.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
194.6
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
187.1
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
144.8
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
132.6
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
125.9
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
122.0
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
118.0
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
104.4
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
90.3
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
82.2
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
80.9
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
80.0
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
61.8
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.