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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 173.8
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 262.5
Min RPKM: 10.2
Std RPKM: 47.9
Median RPKM: 78.4
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
262.5
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
214.9
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
193.5
GTEX-11GSP-3226-SM-5986O
60-69 years, female
188.6
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
177.6
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
176.4
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
173.2
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
173.1
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
171.2
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
161.7
GTEX-1128S-2726-SM-5H12C
60-69 years, female
158.7
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
155.2
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
150.9
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
150.8
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
145.6
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
144.6
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
140.7
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
140.3
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
138.8
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
137.0
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
136.8
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
135.0
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
134.2
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
133.9
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
129.3
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
128.2
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
124.6
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
123.2
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
120.1
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
119.8
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
116.9
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
116.0
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
115.2
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
114.2
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
113.4
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
110.1
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
104.2
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
102.0
GTEX-144FL-3026-SM-5O99C
50-59 years, male
101.5
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
101.0
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
99.5
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
99.3
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
97.9
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
96.7
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
95.4
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
95.3
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
94.9
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
94.8
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
89.8
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
86.9
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
85.1
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
83.5
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
82.3
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
82.2
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
81.6
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
80.8
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
78.6
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
78.2
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
75.8
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
75.3
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
74.3
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
71.8
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
71.7
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
71.6
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
71.0
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
70.9
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
70.4
GTEX-11PRG-2926-SM-5987A
50-59 years, male
70.0
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
69.3
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
67.4
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
66.4
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
65.5
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
64.8
GTEX-145MF-2726-SM-5O995
50-59 years, male
64.3
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
64.0
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
63.8
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
63.0
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
62.4
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
61.3
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
61.1
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
60.7
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
60.3
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
60.0
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
54.9
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
54.4
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
54.4
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
54.2
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
53.8
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
51.9
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
51.6
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
51.4
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
49.6
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
48.7
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
47.9
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
45.8
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
45.6
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
45.4
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
45.3
GTEX-X585-3026-SM-46MWF
50-59 years, male
40.4
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
38.4
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
37.1
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
33.6
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
31.2
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
29.8
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
27.5
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
27.5
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
26.6
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
26.4
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
26.2
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
22.2
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
20.8
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
13.2
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
12.9
GTEX-WL46-2926-SM-3LK82
50-59 years, male
10.2
Show all
Brain - Frontal Cortex (BA9) RPKM: 99.5
Samples: 108
Max RPKM: 323.1
Min RPKM: 4.0
Std RPKM: 66.8
Median RPKM: 89.0
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
323.1
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
305.2
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
239.7
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
222.6
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
221.7
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
215.1
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
210.1
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
208.8
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
206.8
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
199.2
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
193.9
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
192.0
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
190.6
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
190.3
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
189.1
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
187.3
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
172.5
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
170.7
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
167.5
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
166.2
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
158.2
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
153.9
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
151.3
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
151.2
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
151.1
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
149.9
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
144.7
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
143.2
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
141.4
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
137.7
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
133.8
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
131.8
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
130.0
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
129.6
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
128.6
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
124.2
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
118.4
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
112.7
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
111.1
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
109.4
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
107.5
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
105.6
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
104.8
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
104.2
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
102.1
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
98.9
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
97.5
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
97.1
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
94.8
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
91.9
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
91.6
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
91.6
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
90.9
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
89.9
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
88.0
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
87.4
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
85.9
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
85.9
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
84.2
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
76.6
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
76.6
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
75.2
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
71.5
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
70.7
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
68.8
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
68.0
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
67.7
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
65.0
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
64.5
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
59.8
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
59.0
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
57.2
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
56.8
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
56.5
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
55.1
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
50.7
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
49.6
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
45.7
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
45.5
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
44.9
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
44.1
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
43.5
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
42.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
41.0
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
40.5
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
38.4
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
37.8
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
37.4
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
35.8
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
35.3
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
34.1
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
33.5
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
32.8
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
31.8
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
30.2
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
28.3
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
26.1
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
25.6
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
22.6
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
19.1
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
16.7
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
16.3
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
15.1
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
13.8
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
13.6
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
10.1
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
9.4
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
4.0
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.