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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 444.9
Min RPKM: 11.2
Std RPKM: 80.4
Median RPKM: 130.2
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
444.9
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
435.2
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
413.0
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
393.2
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
344.0
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
275.4
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
267.4
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
264.3
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
257.4
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
256.6
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
242.3
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
241.0
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
236.3
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
235.8
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
228.8
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
228.1
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
228.1
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
220.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
220.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
216.5
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
214.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
212.7
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
208.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
206.3
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
205.6
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
203.8
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
202.1
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
201.2
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
196.2
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
193.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
189.2
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
188.7
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
185.0
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
182.0
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
177.0
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
175.1
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
172.6
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
166.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
163.3
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
163.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
160.1
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
156.2
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
155.5
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
153.9
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
152.0
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
151.0
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
150.0
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
149.9
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
146.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
145.8
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
142.7
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
142.3
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
140.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
136.9
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
135.7
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
134.2
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
133.2
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
133.0
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
130.2
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
129.1
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
129.1
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
129.0
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
127.4
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
123.5
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
123.1
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
120.8
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
120.3
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
120.0
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
119.7
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
116.6
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
116.5
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
116.3
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
115.5
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
115.3
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
114.7
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
114.4
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
113.9
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
110.1
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
108.1
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
106.0
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
105.9
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
102.5
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
100.6
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
100.6
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
100.0
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
98.2
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
95.3
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
95.0
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
94.8
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
93.5
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
90.2
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
90.0
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
89.9
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
85.9
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
85.1
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
82.4
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
81.4
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
80.4
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
78.2
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
78.2
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
77.2
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
76.8
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
74.9
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
71.2
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
63.7
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
63.0
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
58.3
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
57.4
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
55.1
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
52.7
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
51.2
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
49.9
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
49.9
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
42.9
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
38.7
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
21.8
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
11.2
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.