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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1611.2
Min RPKM: 96.0
Std RPKM: 247.3
Median RPKM: 587.2
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
1611.2
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
1317.7
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
1244.1
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
1171.1
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
1039.1
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
984.9
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
978.5
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
937.9
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
923.5
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
899.4
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
898.4
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
885.3
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
885.3
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
885.3
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
878.2
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
873.8
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
865.2
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
859.6
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
837.5
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
828.3
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
827.3
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
826.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
815.5
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
772.3
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
772.2
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
770.4
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
765.0
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
758.9
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
754.7
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
748.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
738.0
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
735.3
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
714.5
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
709.6
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
709.0
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
705.4
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
701.1
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
698.0
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
697.6
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
697.2
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
694.9
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
679.4
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
677.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
675.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
642.0
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
638.3
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
630.6
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
626.4
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
623.5
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
622.3
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
606.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
605.6
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
604.8
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
604.5
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
603.1
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
602.3
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
597.6
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
594.4
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
587.2
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
580.0
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
575.7
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
573.1
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
561.4
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
556.9
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
556.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
551.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
547.9
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
540.7
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
536.7
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
530.0
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
525.7
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
513.9
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
513.3
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
490.5
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
489.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
487.4
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
476.6
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
472.5
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
472.2
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
464.7
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
463.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
463.0
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
455.3
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
453.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
444.3
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
438.3
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
431.0
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
429.8
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
413.6
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
411.5
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
411.3
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
405.4
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
395.9
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
389.2
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
382.9
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
382.7
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
378.4
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
375.9
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
370.6
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
363.7
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
358.2
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
354.6
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
350.3
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
347.2
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
322.8
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
319.2
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
312.6
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
310.7
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
300.3
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
285.6
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
278.1
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
249.1
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
223.4
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
214.5
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
117.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
117.0
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
96.0
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.