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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 335.1
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 110.2
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 391.6
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1298.3
Min RPKM: 105.9
Std RPKM: 143.5
Median RPKM: 319.6
GTEX-14753-2426-SM-5LU8U
60-69 years, male
1298.3
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
807.1
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
777.1
GTEX-WFON-1826-SM-3GILG
40-49 years, male
771.7
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
638.4
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
625.6
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
619.4
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
605.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
597.7
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
590.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
581.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
573.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
571.9
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
567.7
GTEX-11OF3-1926-SM-59889
60-69 years, male
564.0
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
549.3
GTEX-111YS-1926-SM-5GICC
60-69 years, male
536.2
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
528.1
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
508.0
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
506.4
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
500.0
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
491.1
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
489.6
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
484.5
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
483.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
482.5
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
481.8
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
479.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
472.3
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
468.5
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
465.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
457.9
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
457.3
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
456.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
451.9
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
450.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
447.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
446.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
446.6
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
443.0
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
439.9
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
439.9
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
439.8
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
437.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
436.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
435.5
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
433.1
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
423.2
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
416.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
412.8
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
409.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
404.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
402.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
399.2
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
396.8
GTEX-R55D-0826-SM-48FEA
50-59 years, male
396.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
395.9
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
395.3
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
392.3
GTEX-X261-0626-SM-3NMD9
50-59 years, male
389.3
GTEX-XBED-1626-SM-47JYN
60-69 years, male
386.9
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
386.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
385.3
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
385.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
382.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
382.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
377.7
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
374.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
370.4
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
369.3
GTEX-11EI6-0626-SM-5985T
60-69 years, male
365.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
364.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
364.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
363.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
359.4
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
355.8
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
355.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
354.3
GTEX-QVJO-1826-SM-447C9
60-69 years, female
352.6
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
348.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
348.6
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
346.8
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
346.7
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
343.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
342.2
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
341.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
341.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
340.9
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
340.6
GTEX-QEL4-2126-SM-447AE
50-59 years, male
339.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
336.0
GTEX-117YX-1426-SM-5H12H
50-59 years, male
334.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
334.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
333.4
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
332.9
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
331.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
329.8
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
328.2
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
327.9
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
323.8
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
323.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
323.1
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
322.6
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
322.6
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
321.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
321.7
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
321.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
317.6
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
317.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
316.1
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
314.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
311.7
GTEX-11P81-1926-SM-5BC53
30-39 years, female
309.3
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
308.1
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
306.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
306.3
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
304.6
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
301.8
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
301.3
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
298.8
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
296.3
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
295.6
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
294.8
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
292.7
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
290.4
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
288.6
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
287.0
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
284.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
283.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
283.3
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
281.6
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
280.5
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
279.5
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
278.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
275.8
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
275.2
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
275.2
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
273.9
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
273.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
273.3
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
267.6
GTEX-1192X-2326-SM-5987X
50-59 years, male
267.5
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
266.1
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
265.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
261.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
259.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
257.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
257.5
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
255.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
255.7
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
247.7
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
246.6
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
245.7
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
245.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
245.6
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
245.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
245.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
242.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
241.4
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
241.2
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
239.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
238.6
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
237.7
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
237.3
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
235.9
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
231.8
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
230.3
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
229.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
227.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
225.1
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
224.6
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
222.6
GTEX-144GM-0926-SM-5O994
20-29 years, male
221.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
220.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
212.4
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
210.0
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
209.8
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
209.6
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
209.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
208.5
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
208.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
205.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
204.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
203.9
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
198.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
197.4
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
197.2
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
195.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
193.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
192.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
190.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
189.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
187.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
186.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
181.5
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
180.3
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
179.4
GTEX-11P82-1326-SM-5HL62
20-29 years, male
178.8
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
174.4
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
173.7
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
168.9
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
159.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
153.5
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
146.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
146.1
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
145.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
144.8
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
139.5
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
123.3
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
123.2
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
123.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
111.9
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
111.8
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
105.9
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.