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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 206.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 182.7
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 108
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 405.5
Min RPKM: 37.0
Std RPKM: 55.6
Median RPKM: 141.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
405.5
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
325.7
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
323.4
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
320.8
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
320.6
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
319.2
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
287.7
GTEX-RU72-0626-SM-46MUI
50-59 years, female
254.7
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
252.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
249.9
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
249.0
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
244.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
239.3
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
238.3
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
238.2
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
236.9
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
229.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
229.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
228.8
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
227.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
225.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
215.6
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
213.6
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
213.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
211.9
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
211.9
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
211.7
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
208.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
207.2
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
206.9
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
204.8
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
203.5
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
202.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
202.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
201.9
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
201.3
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
200.6
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
199.6
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
198.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
197.6
GTEX-13113-1726-SM-5GCOO
60-69 years, female
196.6
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
192.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
190.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
188.8
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
188.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
187.9
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
187.4
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
186.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
184.0
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
183.9
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
178.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
177.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
177.3
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
175.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
175.7
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
175.1
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
174.9
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
173.7
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
172.9
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
172.5
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
171.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
171.8
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
171.3
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
171.0
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
170.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
169.4
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
168.4
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
168.1
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
168.0
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
166.0
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
164.8
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
164.7
GTEX-111YS-1926-SM-5GICC
60-69 years, male
164.2
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
164.1
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
163.3
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
162.7
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
162.7
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
162.2
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
159.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
158.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
158.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
157.6
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
156.7
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
156.6
GTEX-11EI6-0626-SM-5985T
60-69 years, male
156.4
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
155.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
155.0
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
154.1
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
152.8
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
152.0
GTEX-11P81-1926-SM-5BC53
30-39 years, female
151.2
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
151.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
150.0
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
149.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
148.6
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
148.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
146.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
146.1
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
146.1
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
146.0
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
145.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
144.6
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
144.4
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
143.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
143.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
142.0
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
141.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
141.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
141.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
139.7
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
138.2
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
136.8
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
136.5
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
136.5
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
135.8
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
135.5
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
135.3
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
134.7
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
133.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
133.1
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
131.8
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
131.5
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
131.5
GTEX-XBED-1626-SM-47JYN
60-69 years, male
129.7
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
129.5
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
128.6
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
128.4
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
127.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
127.4
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
125.4
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
124.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
124.0
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
123.1
GTEX-14753-2426-SM-5LU8U
60-69 years, male
122.1
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
121.1
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
121.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
121.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
120.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
120.1
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
119.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
119.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
119.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
118.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
118.6
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
118.1
GTEX-QEL4-2126-SM-447AE
50-59 years, male
117.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
117.2
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
117.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
116.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
116.3
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
116.0
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
115.1
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
114.9
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
114.9
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
114.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
114.7
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
114.6
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
113.8
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
112.7
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
111.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
111.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
111.3
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
110.8
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
109.8
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
109.1
GTEX-117YX-1426-SM-5H12H
50-59 years, male
107.3
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
107.1
GTEX-TML8-1226-SM-32QON
40-49 years, female
106.7
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
106.0
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
105.8
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
105.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
105.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
105.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
104.2
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
104.2
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
104.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
104.1
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
103.7
GTEX-117XS-1926-SM-5GICO
60-69 years, male
102.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
101.7
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
100.4
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
100.2
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
100.0
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
99.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
98.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
98.6
GTEX-144GM-0926-SM-5O994
20-29 years, male
98.5
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
98.3
GTEX-T6MN-0726-SM-32PML
50-59 years, male
97.9
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
97.2
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
95.7
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
92.6
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
92.0
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
91.9
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
91.5
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
87.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
87.8
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
87.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
85.5
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
83.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
80.1
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
79.9
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
76.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
74.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
74.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
73.2
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
71.2
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
70.5
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
70.0
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
69.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
64.5
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
63.7
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
62.3
GTEX-11P82-1326-SM-5HL62
20-29 years, male
37.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.