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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 178
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 339.3
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 111.9
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 882.0
Min RPKM: 8.4
Std RPKM: 179.4
Median RPKM: 69.1
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
882.0
GTEX-11P82-1326-SM-5HL62
20-29 years, male
855.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
782.1
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
722.1
GTEX-117YX-1426-SM-5H12H
50-59 years, male
658.4
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
645.6
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
629.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
615.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
611.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
601.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
565.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
544.8
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
544.5
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
505.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
504.0
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
472.1
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
463.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
457.5
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
451.9
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
448.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
437.6
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
420.9
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
415.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
397.4
GTEX-REY6-2426-SM-48FF5
60-69 years, male
394.0
GTEX-R55D-0826-SM-48FEA
50-59 years, male
389.7
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
381.2
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
371.9
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
357.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
343.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
337.1
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
334.5
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
326.5
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
313.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
308.0
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
305.9
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
279.2
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
276.9
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
270.6
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
258.7
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
255.5
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
254.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
252.8
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
241.5
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
240.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
238.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
236.9
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
232.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
226.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
222.8
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
218.3
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
218.3
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
212.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
211.5
GTEX-144GM-0926-SM-5O994
20-29 years, male
206.0
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
205.5
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
204.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
203.2
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
202.7
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
197.5
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
192.2
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
189.2
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
186.0
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
185.1
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
183.3
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
179.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
171.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
169.8
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
163.1
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
157.2
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
157.1
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
154.8
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
150.5
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
149.4
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
148.2
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
144.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
139.9
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
137.8
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
128.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
124.0
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
121.3
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
120.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
117.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
113.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
110.7
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
110.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
109.1
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
108.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
108.2
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
104.6
GTEX-QEL4-2126-SM-447AE
50-59 years, male
99.3
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
99.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
97.5
GTEX-TML8-1226-SM-32QON
40-49 years, female
95.0
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
94.9
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
91.0
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
90.2
GTEX-13113-1726-SM-5GCOO
60-69 years, female
88.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
85.3
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
83.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
82.1
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
80.0
GTEX-1122O-1226-SM-5H113
60-69 years, female
75.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
74.5
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
73.9
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
73.1
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
70.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
68.1
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
67.5
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
65.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
61.9
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
61.4
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
59.2
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
59.1
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
59.0
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
58.5
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
56.7
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
56.5
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
55.0
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
54.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
53.2
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
52.9
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
51.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
51.3
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
51.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
51.1
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
50.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
50.5
GTEX-QVJO-1826-SM-447C9
60-69 years, female
49.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
49.4
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
48.6
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
48.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
46.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
46.3
GTEX-X261-0626-SM-3NMD9
50-59 years, male
45.9
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
43.7
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
43.6
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
42.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
42.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
42.5
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
41.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
41.3
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
37.9
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
37.5
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
36.1
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
35.5
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
35.5
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
35.4
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
34.7
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
33.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
33.0
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
32.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
32.1
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
31.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
31.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
31.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
31.3
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
31.2
GTEX-111YS-1926-SM-5GICC
60-69 years, male
30.7
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
30.7
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
30.4
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
30.2
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
29.0
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
28.1
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
26.1
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
24.5
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
24.4
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
23.5
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
23.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
23.3
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
23.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
22.8
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
22.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
22.5
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
22.2
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
22.1
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
21.4
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
20.9
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
20.6
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
20.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
20.3
GTEX-T6MN-0726-SM-32PML
50-59 years, male
20.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
19.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
18.9
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
18.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
18.7
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
18.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
18.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
18.2
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
18.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
18.0
GTEX-11EI6-0626-SM-5985T
60-69 years, male
17.5
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
17.5
GTEX-RU72-0626-SM-46MUI
50-59 years, female
17.4
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
15.9
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
15.8
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
15.7
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
15.5
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
15.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
14.3
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
13.5
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
13.1
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
12.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
12.3
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
12.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
11.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
11.5
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
11.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
10.7
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
10.7
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
10.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
9.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
8.5
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
8.4
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.