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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 780.5
Min RPKM: 35.2
Std RPKM: 121.7
Median RPKM: 184.1
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
780.5
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
747.2
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
540.2
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
464.5
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
418.2
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
400.2
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
367.1
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
347.7
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
339.7
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
323.9
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
314.1
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
303.5
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
303.4
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
298.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
290.2
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
285.0
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
283.6
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
262.2
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
249.2
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
244.8
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
240.2
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
233.9
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
231.6
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
229.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
228.3
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
227.4
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
227.4
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
227.3
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
225.8
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
223.5
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
222.5
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
221.9
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
220.5
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
219.0
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
218.0
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
217.4
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
203.2
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
202.0
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
197.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
197.1
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
196.7
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
196.4
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
196.0
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
193.8
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
190.8
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
187.2
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
185.2
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
183.0
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
181.9
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
181.3
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
179.1
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
179.0
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
178.4
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
169.7
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
169.4
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
168.5
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
168.1
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
167.9
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
167.8
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
163.4
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
160.0
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
159.6
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
159.0
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
156.7
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
156.4
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
155.5
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
151.7
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
147.6
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
144.9
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
144.7
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
143.4
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
142.6
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
137.0
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
136.5
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
136.1
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
135.8
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
135.3
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
125.6
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
115.8
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
110.5
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
103.3
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
99.2
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
91.9
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
78.6
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
74.3
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
71.3
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
67.9
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
65.2
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
64.7
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
64.2
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
61.6
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
58.6
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
57.0
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
35.2
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.