We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 237.2
Min RPKM: 86.5
Std RPKM: 31.7
Median RPKM: 131.2
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
237.2
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
228.2
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
219.0
GTEX-111YS-1426-SM-5GID8
60-69 years, male
218.5
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
202.8
GTEX-117YX-0326-SM-5GICL
50-59 years, male
199.2
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
195.7
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
190.3
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
190.3
GTEX-1192X-2526-SM-59868
50-59 years, male
189.9
GTEX-13111-1426-SM-5DUW3
50-59 years, male
186.2
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
183.0
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
175.6
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
172.9
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
172.6
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
172.0
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
169.0
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
167.4
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
162.1
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
158.8
GTEX-1122O-1326-SM-5H11F
60-69 years, female
158.0
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
155.7
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
155.1
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
153.9
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
152.0
GTEX-ZTSS-0926-SM-59865
40-49 years, male
151.8
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
151.1
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
150.1
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
149.2
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
147.7
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
145.6
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
145.5
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
145.3
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
143.1
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
142.9
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
140.9
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
138.3
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
136.3
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
135.5
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
133.9
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
133.8
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
133.5
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
132.4
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
131.9
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
130.5
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
130.4
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
130.3
GTEX-13O61-1326-SM-5KM31
60-69 years, male
129.8
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
129.3
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
128.1
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
127.9
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
127.9
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
127.4
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
126.8
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
126.4
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
126.0
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
125.3
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
125.3
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
124.2
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
124.1
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
123.5
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
122.8
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
122.6
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
122.6
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
121.8
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
121.6
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
121.2
GTEX-13113-1226-SM-5EGHT
60-69 years, female
121.0
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
121.0
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
118.9
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
118.7
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
117.4
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
116.9
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
115.1
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
115.0
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
112.4
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
110.5
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
109.9
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
108.8
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
108.0
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
106.1
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
105.3
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
105.3
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
99.4
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
96.5
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
93.9
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
87.9
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
86.5
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.