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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 352.2
Min RPKM: 33.7
Std RPKM: 77.0
Median RPKM: 142.2
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
352.2
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
351.1
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
338.1
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
336.7
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
287.2
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
286.4
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
283.4
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
280.0
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
273.5
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
262.6
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
249.0
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
245.1
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
237.4
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
230.4
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
230.1
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
225.9
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
225.4
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
221.1
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
218.2
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
217.3
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
209.1
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
205.7
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
204.6
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
204.4
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
203.0
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
202.7
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
201.5
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
200.7
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
199.6
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
196.9
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
194.2
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
191.6
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
190.7
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
186.4
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
178.5
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
177.8
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
176.2
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
174.4
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
170.9
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
169.3
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
168.9
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
161.2
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
160.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
155.4
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
151.7
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
146.0
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
145.5
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
138.8
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
138.7
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
136.4
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
135.8
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
135.3
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
135.2
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
135.0
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
130.6
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
128.8
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
127.7
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
125.1
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
123.1
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
120.7
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
120.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
119.0
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
118.2
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
111.1
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
108.9
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
108.6
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
108.0
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
107.6
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
105.2
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
98.4
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
96.0
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
94.2
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
92.0
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
87.4
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
82.6
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
82.1
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
79.3
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
75.2
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
70.9
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
64.0
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
63.2
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
62.4
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
62.0
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
58.8
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
53.9
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
53.4
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
53.0
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
49.4
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
48.4
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
48.1
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
47.8
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
42.2
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
42.2
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
33.7
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.