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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 2075.2
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 631.1
Min RPKM: 118.5
Std RPKM: 81.2
Median RPKM: 290.6
GTEX-X585-3026-SM-46MWF
50-59 years, male
631.1
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
479.4
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
416.2
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
414.8
GTEX-WL46-2926-SM-3LK82
50-59 years, male
413.9
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
412.9
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
404.7
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
399.3
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
392.1
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
391.4
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
390.3
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
383.5
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
382.8
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
382.8
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
379.8
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
379.1
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
378.0
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
374.2
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
372.1
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
368.6
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
357.6
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
355.2
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
353.0
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
351.1
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
345.9
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
345.2
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
337.0
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
334.3
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
330.0
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
328.3
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
328.0
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
327.9
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
327.1
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
325.4
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
322.5
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
322.3
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
314.3
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
314.2
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
313.1
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
312.3
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
311.4
GTEX-144FL-3026-SM-5O99C
50-59 years, male
309.1
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
309.0
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
306.4
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
306.1
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
305.3
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
303.2
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
302.4
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
300.5
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
300.2
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
299.5
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
298.6
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
297.8
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
294.1
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
293.7
GTEX-145MF-2726-SM-5O995
50-59 years, male
292.7
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
291.0
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
290.2
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
290.1
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
288.7
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
288.4
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
288.1
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
286.9
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
284.0
GTEX-11PRG-2926-SM-5987A
50-59 years, male
282.3
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
280.4
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
275.9
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
268.9
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
267.0
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
266.1
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
265.8
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
262.1
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
262.0
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
260.2
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
255.8
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
249.5
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
248.6
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
248.0
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
247.7
GTEX-1128S-2726-SM-5H12C
60-69 years, female
243.6
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
241.0
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
239.6
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
237.5
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
236.2
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
235.3
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
231.1
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
229.3
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
225.1
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
223.2
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
223.1
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
219.7
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
211.2
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
209.1
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
208.2
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
203.5
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
201.3
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
199.9
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
194.8
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
192.0
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
191.2
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
188.8
GTEX-11GSP-3226-SM-5986O
60-69 years, female
183.3
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
172.1
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
170.2
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
168.8
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
164.8
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
160.1
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
158.7
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
156.0
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
152.3
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
145.4
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
142.3
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
141.8
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
118.5
Show all
Brain - Frontal Cortex (BA9) RPKM: 255.8
Samples: 108
Max RPKM: 507.5
Min RPKM: 92.1
Std RPKM: 83.9
Median RPKM: 264.3
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
507.5
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
483.4
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
421.4
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
413.3
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
385.0
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
376.5
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
370.5
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
368.5
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
362.3
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
361.4
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
359.5
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
345.9
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
340.1
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
337.7
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
335.5
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
334.6
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
334.1
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
334.0
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
330.9
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
330.8
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
330.5
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
322.4
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
319.3
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
319.3
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
318.9
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
316.8
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
316.8
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
313.7
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
313.1
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
310.4
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
307.0
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
302.1
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
301.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
297.6
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
294.5
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
294.5
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
292.5
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
291.5
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
291.2
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
290.6
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
290.1
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
289.2
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
288.7
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
286.7
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
283.8
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
283.3
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
281.7
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
280.9
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
277.2
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
276.1
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
273.9
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
272.1
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
266.1
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
264.6
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
264.0
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
259.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
258.3
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
257.8
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
256.6
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
256.5
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
256.0
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
253.6
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
248.3
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
246.4
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
246.0
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
246.0
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
238.3
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
235.2
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
226.4
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
220.9
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
220.9
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
220.2
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
212.9
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
211.6
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
211.2
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
202.3
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
200.7
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
199.3
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
199.1
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
192.7
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
189.4
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
189.0
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
186.9
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
182.7
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
175.7
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
172.8
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
168.4
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
163.9
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
159.9
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
156.2
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
155.8
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
149.7
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
146.6
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
145.4
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
144.1
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
142.6
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
142.1
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
136.7
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
136.4
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
132.1
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
128.9
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
125.7
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
121.8
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
121.0
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
112.5
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
112.2
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
108.1
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
92.1
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.