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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 267.8
Min RPKM: 49.3
Std RPKM: 54.9
Median RPKM: 170.4
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
267.8
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
263.1
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
261.8
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
261.2
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
253.3
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
247.7
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
240.8
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
239.6
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
236.5
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
236.4
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
235.5
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
235.1
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
232.9
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
232.8
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
232.0
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
229.1
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
229.0
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
227.2
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
225.0
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
224.5
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
224.3
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
224.2
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
222.8
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
221.5
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
219.1
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
216.5
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
214.0
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
213.7
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
212.6
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
212.5
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
212.4
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
211.8
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
210.6
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
206.6
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
206.5
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
205.5
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
201.9
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
199.0
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
199.0
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
198.9
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
192.3
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
190.3
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
187.5
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
187.1
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
186.8
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
185.6
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
182.8
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
181.5
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
180.9
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
179.0
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
178.7
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
177.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
177.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
176.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
176.6
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
174.2
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
171.3
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
170.9
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
170.4
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
170.1
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
169.7
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
165.9
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
164.4
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
162.2
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
160.8
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
159.7
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
159.7
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
159.5
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
159.5
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
158.3
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
157.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
155.5
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
153.5
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
153.3
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
151.2
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
148.9
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
143.2
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
141.1
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
140.8
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
138.8
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
138.0
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
136.4
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
135.7
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
135.0
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
129.9
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
127.6
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
123.5
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
119.0
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
117.4
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
116.3
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
115.3
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
114.8
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
114.5
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
113.3
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
106.9
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
106.7
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
106.7
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
105.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
105.6
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
98.6
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
97.4
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
97.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
96.5
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
88.1
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
85.5
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
84.8
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
83.2
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
78.3
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
77.8
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
77.6
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
77.0
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
73.5
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
73.3
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
63.2
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
53.3
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
51.7
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
49.3
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.