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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 337.7
Min RPKM: 143.4
Std RPKM: 39.2
Median RPKM: 227.0
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
337.7
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
330.3
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
316.8
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
302.2
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
296.3
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
295.5
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
293.0
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
288.8
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
280.2
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
278.4
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
278.4
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
277.9
GTEX-QV31-0126-SM-447BP
30-39 years, male
275.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
274.6
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
273.1
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
273.0
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
271.4
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
270.5
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
269.0
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
268.4
GTEX-R55G-0226-SM-48FEI
40-49 years, female
268.2
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
267.7
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
267.1
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
266.7
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
266.6
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
266.3
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
264.8
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
263.1
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
263.0
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
256.3
GTEX-QLQW-0126-SM-447BK
30-39 years, male
255.8
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
255.4
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
255.3
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
254.7
GTEX-QCQG-0226-SM-48U28
50-59 years, female
253.2
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
253.2
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
250.7
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
250.6
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
250.2
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
249.7
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
249.0
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
247.0
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
245.5
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
244.6
GTEX-PX3G-0926-SM-48U12
20-29 years, female
242.8
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
239.5
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
237.5
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
234.6
GTEX-144GN-2126-SM-5O99D
50-59 years, male
232.9
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
231.6
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
228.2
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
227.8
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
226.1
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
224.2
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
221.6
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
221.6
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
221.1
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
220.3
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
219.9
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
219.6
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
218.0
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
217.4
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
216.6
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
216.0
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
215.3
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
211.7
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
210.3
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
209.3
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
209.2
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
207.8
GTEX-13111-0126-SM-5EGHO
50-59 years, male
207.0
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
206.4
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
206.4
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
204.7
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
204.1
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
202.6
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
202.0
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
201.6
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
200.3
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
200.3
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
200.2
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
199.4
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
199.2
GTEX-X585-1826-SM-4QAS3
50-59 years, male
199.2
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
198.3
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
197.9
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
197.8
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
195.8
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
194.6
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
194.4
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
193.9
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
188.7
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
188.6
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
185.5
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
180.9
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
178.6
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
178.2
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
177.8
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
174.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
168.5
GTEX-Q734-0226-SM-48U1A
40-49 years, female
168.2
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
156.2
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
155.4
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
143.4
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.