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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 758.6
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 529.7
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 396.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 786.0
Min RPKM: 101.9
Std RPKM: 78.0
Median RPKM: 204.7
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
786.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
610.6
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
522.4
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
463.6
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
452.4
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
375.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
374.6
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
371.5
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
345.3
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
343.8
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
341.7
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
335.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
331.1
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
325.3
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
317.7
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
316.0
GTEX-QEL4-2126-SM-447AE
50-59 years, male
313.5
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
311.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
306.8
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
305.2
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
303.9
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
297.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
295.9
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
294.1
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
291.4
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
289.6
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
288.0
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
285.8
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
284.0
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
282.8
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
280.8
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
279.7
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
279.5
GTEX-1192X-2326-SM-5987X
50-59 years, male
272.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
271.6
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
268.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
266.9
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
265.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
262.9
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
262.8
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
259.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
257.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
256.2
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
254.1
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
251.1
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
249.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
248.8
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
246.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
246.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
245.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
244.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
243.9
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
242.4
GTEX-14753-2426-SM-5LU8U
60-69 years, male
242.1
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
241.7
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
241.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
240.0
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
238.7
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
237.5
GTEX-RU72-0626-SM-46MUI
50-59 years, female
237.0
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
236.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
236.0
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
235.8
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
235.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
234.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
233.1
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
232.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
232.1
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
231.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
227.1
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
227.0
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
225.9
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
225.9
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
225.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
224.9
GTEX-13113-1726-SM-5GCOO
60-69 years, female
224.3
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
224.2
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
223.8
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
222.4
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
222.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
220.4
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
220.3
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
219.6
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
219.2
GTEX-S341-1526-SM-4AD6K
40-49 years, female
217.8
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
216.7
GTEX-11P82-1326-SM-5HL62
20-29 years, male
215.7
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
215.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
215.0
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
215.0
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
214.5
GTEX-11EI6-0626-SM-5985T
60-69 years, male
214.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
214.2
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
213.3
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
211.5
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
211.4
GTEX-QVJO-1826-SM-447C9
60-69 years, female
211.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
211.0
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
208.8
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
208.7
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
208.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
208.3
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
207.3
GTEX-XBED-1626-SM-47JYN
60-69 years, male
206.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
205.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
205.1
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
204.9
GTEX-X261-0626-SM-3NMD9
50-59 years, male
204.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
203.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
202.9
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
202.9
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
202.5
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
200.8
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
200.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
200.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
199.8
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
199.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
198.2
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
197.9
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
197.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
195.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
194.6
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
194.0
GTEX-1122O-1226-SM-5H113
60-69 years, female
192.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
192.9
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
192.5
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
192.2
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
192.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
191.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
190.9
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
190.6
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
190.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
190.3
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
190.1
GTEX-11P81-1926-SM-5BC53
30-39 years, female
189.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
188.8
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
188.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
187.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
187.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
187.4
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
187.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
186.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
186.5
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
186.2
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
185.5
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
185.1
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
185.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
184.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
182.5
GTEX-111YS-1926-SM-5GICC
60-69 years, male
181.7
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
180.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
179.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
179.8
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
179.3
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
179.3
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
179.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
178.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
178.8
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
177.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
177.5
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
177.0
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
176.5
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
176.3
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
175.8
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
175.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
175.4
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
175.0
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
174.2
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
173.9
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
170.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
170.4
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
169.9
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
169.6
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
168.7
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
168.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
167.7
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
166.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
166.5
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
164.6
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
164.2
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
158.3
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
157.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
157.0
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
155.8
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
154.8
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
153.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
153.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
152.9
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
151.4
GTEX-REY6-2426-SM-48FF5
60-69 years, male
149.9
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
149.5
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
149.3
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
149.0
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
148.0
GTEX-R55D-0826-SM-48FEA
50-59 years, male
146.5
GTEX-T6MN-0726-SM-32PML
50-59 years, male
145.7
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
144.2
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
143.4
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
143.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
142.7
GTEX-R53T-1526-SM-48FEK
50-59 years, female
140.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
137.7
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
136.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
135.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
132.4
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
131.5
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
130.5
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
123.5
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
122.5
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
118.4
GTEX-WFON-1826-SM-3GILG
40-49 years, male
117.3
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
114.7
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
104.1
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
101.9
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.