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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 197.3
Min RPKM: 2.0
Std RPKM: 49.8
Median RPKM: 86.5
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
197.3
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
177.8
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
173.9
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
173.4
GTEX-111YS-1426-SM-5GID8
60-69 years, male
166.9
GTEX-ZTSS-0926-SM-59865
40-49 years, male
165.5
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
157.6
GTEX-1122O-1326-SM-5H11F
60-69 years, female
156.8
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
155.3
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
153.5
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
152.1
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
147.6
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
139.8
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
138.4
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
137.0
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
136.1
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
135.2
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
131.4
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
129.0
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
128.3
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
127.8
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
124.7
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
124.7
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
123.5
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
123.2
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
122.1
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
118.7
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
118.7
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
117.3
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
117.1
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
116.7
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
114.8
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
109.6
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
105.2
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
104.7
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
104.2
GTEX-13113-1226-SM-5EGHT
60-69 years, female
102.6
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
100.0
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
98.9
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
95.9
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
94.8
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
94.4
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
92.3
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
87.5
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
85.6
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
84.2
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
83.9
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
83.8
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
83.5
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
83.1
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
78.5
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
72.8
GTEX-13O61-1326-SM-5KM31
60-69 years, male
72.5
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
69.9
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
69.1
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
68.2
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
67.7
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
67.5
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
63.8
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
62.4
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
62.0
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
60.5
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
57.4
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
57.4
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
56.2
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
56.2
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
56.2
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
45.9
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
43.2
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
38.7
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
34.6
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
32.4
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
31.6
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
31.0
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
30.3
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
23.6
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
19.0
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
19.0
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
11.6
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
9.3
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
7.8
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
7.1
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
6.5
GTEX-13111-1426-SM-5DUW3
50-59 years, male
5.4
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
5.3
GTEX-117YX-0326-SM-5GICL
50-59 years, male
2.8
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
2.8
GTEX-1192X-2526-SM-59868
50-59 years, male
2.0
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 85
