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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 902.7
Min RPKM: 310.2
Std RPKM: 113.7
Median RPKM: 469.7
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
902.7
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
753.5
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
728.7
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
721.9
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
720.8
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
703.7
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
688.7
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
666.1
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
658.0
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
657.9
GTEX-RU72-2226-SM-46MUE
50-59 years, female
654.1
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
649.5
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
638.1
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
636.0
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
628.1
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
625.6
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
622.7
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
612.4
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
608.6
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
605.1
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
598.9
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
581.7
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
560.0
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
554.5
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
551.2
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
544.3
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
537.5
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
533.1
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
531.0
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
528.9
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
528.0
GTEX-S32W-1226-SM-4AD67
50-59 years, female
526.9
GTEX-11I78-1926-SM-59878
50-59 years, female
522.8
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
522.2
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
521.8
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
514.9
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
509.2
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
508.8
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
506.1
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
505.4
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
501.9
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
498.0
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
495.8
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
488.9
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
488.6
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
482.9
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
472.1
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
471.4
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
469.7
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
469.5
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
469.0
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
468.0
GTEX-P78B-1926-SM-3P616
40-49 years, female
466.5
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
463.1
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
461.2
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
460.0
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
459.3
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
459.1
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
458.7
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
455.6
GTEX-S341-0726-SM-4AD5R
40-49 years, female
454.8
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
453.9
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
453.8
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
448.0
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
447.9
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
440.2
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
436.4
GTEX-QCQG-1426-SM-48U22
50-59 years, female
432.8
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
430.4
GTEX-Q734-0726-SM-48TZP
40-49 years, female
427.9
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
426.4
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
425.9
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
424.2
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
422.4
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
419.8
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
418.4
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
418.3
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
415.4
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
407.8
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
404.7
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
402.0
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
384.1
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
377.3
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
375.5
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
373.9
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
364.0
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
359.4
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
349.1
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
344.8
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
339.5
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
338.5
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
323.8
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
322.7
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
321.6
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
321.3
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
310.8
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
310.2
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.