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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 21
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 5.7
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 3.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 696.0
Min RPKM: 5.3
Std RPKM: 75.0
Median RPKM: 62.7
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
696.0
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
411.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
302.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
288.8
GTEX-14753-2426-SM-5LU8U
60-69 years, male
287.4
GTEX-REY6-2426-SM-48FF5
60-69 years, male
279.9
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
278.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
269.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
263.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
263.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
254.1
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
236.6
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
207.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
194.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
182.7
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
181.1
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
179.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
174.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
168.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
161.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
159.9
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
150.7
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
145.4
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
143.9
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
140.0
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
136.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
127.5
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
126.2
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
125.9
GTEX-13113-1726-SM-5GCOO
60-69 years, female
125.6
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
123.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
123.0
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
121.6
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
121.4
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
119.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
118.4
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
118.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
115.4
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
115.0
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
113.4
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
113.4
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
108.7
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
105.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
105.3
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
105.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
105.1
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
104.0
GTEX-117XS-1926-SM-5GICO
60-69 years, male
103.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
100.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
97.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
97.3
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
97.1
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
97.1
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
96.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
94.1
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
93.5
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
93.2
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
92.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
91.4
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
90.7
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
90.0
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
89.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
89.4
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
88.5
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
87.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
87.7
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
86.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
86.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
85.8
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
83.5
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
82.8
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
82.4
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
81.5
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
81.5
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
80.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
80.7
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
80.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
79.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
79.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
79.3
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
78.4
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
78.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
78.0
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
77.9
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
76.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
75.1
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
73.7
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
72.2
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
72.0
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
71.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
70.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
70.2
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
69.3
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
68.9
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
68.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
68.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
68.3
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
67.5
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
67.5
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
66.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
66.7
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
66.2
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
65.2
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
65.1
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
64.7
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
64.6
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
63.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
62.0
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
61.8
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
61.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
61.0
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
59.9
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
59.4
GTEX-117YX-1426-SM-5H12H
50-59 years, male
59.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
59.3
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
58.3
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
57.6
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
57.5
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
56.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
56.2
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
55.8
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
55.5
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
55.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
55.0
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
54.5
GTEX-11P81-1926-SM-5BC53
30-39 years, female
54.4
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
53.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
51.7
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
50.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
49.9
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
49.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
49.3
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
49.2
GTEX-1122O-1226-SM-5H113
60-69 years, female
48.8
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
48.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
47.9
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
46.4
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
46.4
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
45.9
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
45.5
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
45.1
GTEX-T6MN-0726-SM-32PML
50-59 years, male
44.6
GTEX-TML8-1226-SM-32QON
40-49 years, female
44.6
GTEX-1192X-2326-SM-5987X
50-59 years, male
44.2
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
44.0
GTEX-11OF3-1926-SM-59889
60-69 years, male
43.8
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
43.8
GTEX-RU72-0626-SM-46MUI
50-59 years, female
43.6
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
43.5
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
43.3
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
43.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
43.2
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
42.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
42.8
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
42.7
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
42.6
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
42.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
42.1
GTEX-WFON-1826-SM-3GILG
40-49 years, male
41.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
40.7
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
40.5
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
40.3
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
40.2
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
40.1
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
39.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
39.4
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
39.4
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
39.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
37.4
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
37.1
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
36.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
35.9
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
34.9
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
34.8
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
34.7
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
34.4
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
34.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
33.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
33.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
33.2
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
32.7
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
32.5
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
32.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
31.6
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
31.2
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
30.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
30.2
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
30.1
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
29.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
29.3
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
29.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
28.2
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
27.9
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
26.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
26.2
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
25.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
25.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
25.2
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
25.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
25.0
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
23.9
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
22.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
21.8
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
21.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
18.7
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
18.4
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
18.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
18.2
GTEX-111YS-1926-SM-5GICC
60-69 years, male
17.0
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
16.6
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
14.4
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
13.1
GTEX-11P82-1326-SM-5HL62
20-29 years, male
10.8
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
5.3
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.