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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 846.0
Min RPKM: 316.5
Std RPKM: 106.7
Median RPKM: 474.2
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
846.0
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
780.5
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
777.6
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
767.7
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
762.3
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
746.7
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
695.1
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
652.5
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
636.0
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
634.9
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
621.3
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
620.3
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
617.6
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
610.5
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
610.5
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
606.1
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
598.2
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
592.7
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
585.4
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
584.7
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
584.2
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
577.9
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
576.2
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
576.1
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
571.5
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
565.4
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
562.3
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
560.5
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
547.7
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
544.4
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
543.6
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
543.3
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
541.8
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
530.0
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
525.6
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
521.4
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
518.1
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
510.2
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
509.1
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
497.9
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
495.1
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
492.5
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
490.4
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
490.1
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
478.2
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
477.0
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
476.4
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
474.3
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
474.0
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
472.0
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
466.3
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
466.1
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
466.0
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
465.1
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
463.7
GTEX-QCQG-1226-SM-48U23
50-59 years, female
461.5
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
457.6
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
455.5
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
455.0
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
453.9
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
451.7
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
451.6
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
449.9
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
448.5
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
447.3
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
446.5
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
444.1
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
443.7
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
442.2
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
441.6
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
428.5
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
426.7
GTEX-S341-1226-SM-4AD5S
40-49 years, female
425.3
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
425.3
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
425.2
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
419.8
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
419.2
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
413.6
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
411.0
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
409.6
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
405.4
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
404.9
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
398.8
GTEX-11I78-2026-SM-5987C
50-59 years, female
397.5
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
394.2
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
392.6
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
391.9
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
389.2
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
386.8
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
385.2
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
372.1
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
371.9
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
362.2
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
355.1
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
340.3
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
316.5
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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