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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 249.6
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 241.5
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 282.9
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 314.9
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 296.9
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 404.7
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 283.1
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 410.1
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 348.1
Min RPKM: 63.5
Std RPKM: 51.4
Median RPKM: 153.8
GTEX-REY6-1226-SM-48FDR
60-69 years, male
348.1
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
345.0
GTEX-S32W-1926-SM-4AD63
50-59 years, female
317.8
GTEX-12696-0826-SM-5EGGE
60-69 years, male
311.7
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
295.8
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
263.7
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
261.1
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
253.8
GTEX-QEL4-1226-SM-447A4
50-59 years, male
239.7
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
234.7
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
229.2
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
223.2
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
218.2
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
217.4
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
212.4
GTEX-RN64-1826-SM-48FDV
50-59 years, male
211.0
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
210.1
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
209.0
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
208.1
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
203.3
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
203.1
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
199.8
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
199.3
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
196.7
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
195.2
GTEX-11ZUS-2526-SM-59872
30-39 years, male
195.1
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
192.9
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
192.7
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
191.7
GTEX-X261-1726-SM-4PQYT
50-59 years, male
188.5
GTEX-QESD-2026-SM-447BI
20-29 years, male
187.9
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
185.9
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
183.5
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
183.0
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
178.6
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
178.4
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
175.4
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
175.2
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
174.8
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
174.2
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
174.0
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
173.7
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
173.4
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
171.9
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
169.8
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
169.7
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
168.2
GTEX-S33H-1626-SM-4AD68
30-39 years, male
166.9
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
166.0
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
161.3
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
161.1
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
160.9
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
160.7
GTEX-RU72-1426-SM-46MUF
50-59 years, female
160.5
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
159.2
GTEX-Q734-0326-SM-48U15
40-49 years, female
159.2
GTEX-YECK-1926-SM-4W21H
60-69 years, male
157.4
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
154.7
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
154.5
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
153.8
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
152.6
GTEX-13112-1426-SM-5EGH8
50-59 years, male
152.5
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
151.7
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
151.5
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
151.4
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
150.9
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
150.7
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
149.9
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
149.3
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
149.1
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
149.1
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
148.2
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
147.1
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
145.5
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
145.5
GTEX-P78B-1326-SM-3P611
40-49 years, female
143.9
GTEX-1399T-0826-SM-5IFES
60-69 years, male
143.8
GTEX-R53T-0326-SM-48FEC
50-59 years, female
143.6
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
142.9
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
142.8
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
142.7
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
142.7
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
141.9
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
141.7
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
140.4
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
136.5
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
136.2
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
135.7
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
135.1
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
133.2
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
133.0
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
132.8
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
131.8
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
131.5
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
130.4
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
126.3
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
126.1
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
123.8
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
122.8
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
122.7
GTEX-13113-1326-SM-5GCOI
60-69 years, female
121.8
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
119.5
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
117.4
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
111.4
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
109.2
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
108.7
GTEX-11GSP-0626-SM-5986T
60-69 years, female
98.6
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
98.2
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
98.0
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
96.9
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
96.7
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
95.6
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
94.7
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
93.3
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
93.0
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
91.7
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
87.1
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
86.6
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
63.5
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
