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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 69.9
Min RPKM: 5.3
Std RPKM: 14.8
Median RPKM: 21.5
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
69.9
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
69.7
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
62.9
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
59.1
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
58.8
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
55.7
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
52.9
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
52.2
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
51.7
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
45.5
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
44.4
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
43.5
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
42.9
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
42.9
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
40.0
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
39.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
37.6
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
35.8
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
33.9
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
33.6
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
32.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
31.9
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
31.6
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
31.2
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
30.3
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
29.9
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
29.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
28.7
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
27.7
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
27.5
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
27.1
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
26.4
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
25.7
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
25.6
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
25.6
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
25.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
25.1
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
25.1
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
23.5
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
22.9
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
22.8
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
22.7
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
22.5
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
22.3
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
22.2
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
21.5
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
21.5
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
21.5
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
20.6
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
20.1
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
19.3
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
19.3
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
19.0
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
18.8
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
18.6
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
18.3
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
18.2
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
17.9
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
17.5
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
17.2
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
17.1
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
16.8
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
16.6
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
15.8
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
15.6
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
15.4
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
15.3
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
15.1
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
14.8
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
13.9
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
13.6
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
13.6
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
13.4
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
13.1
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
12.7
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
12.3
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
12.1
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
12.1
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
11.7
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
11.5
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
11.4
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
11.2
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
10.6
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
9.9
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
9.9
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
9.6
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
9.2
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
9.1
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
7.1
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
6.9
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
6.4
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
6.3
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
5.5
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
5.3
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.