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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 101.5
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 71.5
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 44.4
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 88.7
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 120.9
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 73.3
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 6
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 28.7
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 11.2
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 212.9
Min RPKM: 37.3
Std RPKM: 37.3
Median RPKM: 131.1
GTEX-Y111-2426-SM-4TT23
50-59 years, male
212.9
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
199.0
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
198.4
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
197.6
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
191.0
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
189.1
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
188.9
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
187.3
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
185.0
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
184.4
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
182.6
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
178.2
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
176.2
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
175.7
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
174.5
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
170.8
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
169.7
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
168.4
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
168.0
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
167.7
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
167.6
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
167.4
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
167.0
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
166.8
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
166.1
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
166.1
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
165.2
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
164.9
GTEX-REY6-0126-SM-48FDT
60-69 years, male
162.1
GTEX-11DXZ-2126-SM-59881
50-59 years, male
160.9
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
159.7
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
159.5
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
157.8
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
155.4
GTEX-13112-0226-SM-5P9IV
50-59 years, male
154.4
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
153.6
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
153.4
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
153.4
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
153.3
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
153.1
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
152.8
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
152.6
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
151.3
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
150.7
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
150.3
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
149.2
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
149.0
GTEX-S95S-1126-SM-4B64E
60-69 years, male
148.6
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
147.7
GTEX-11OF3-1826-SM-5987N
60-69 years, male
147.4
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
147.3
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
147.2
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
147.1
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
146.9
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
146.9
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
146.4
GTEX-117XS-2026-SM-5GID1
60-69 years, male
146.3
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
146.1
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
144.6
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
140.4
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
139.9
GTEX-12696-0226-SM-5EGL3
60-69 years, male
139.1
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
138.7
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
138.7
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
138.2
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
138.0
GTEX-V955-1926-SM-4KL1L
60-69 years, male
137.9
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
137.3
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
136.6
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
135.7
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
135.4
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
135.4
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
135.1
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
134.9
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
134.2
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
133.6
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
133.3
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
133.2
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
133.2
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
133.1
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
132.7
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
132.6
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
132.1
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
131.5
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
131.4
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
131.2
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
131.0
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
130.4
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
130.1
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
129.1
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
127.5
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
125.9
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
125.4
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
125.3
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
125.1
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
125.0
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
124.6
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
124.3
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
121.2
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
120.2
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
118.9
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
118.9
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
118.3
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
118.2
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
117.1
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
117.0
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
116.8
GTEX-R55D-0126-SM-48FEL
50-59 years, male
115.9
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
115.9
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
114.5
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
113.8
GTEX-R55C-1426-SM-48FED
40-49 years, male
113.5
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
112.6
GTEX-13111-1526-SM-5EGJX
50-59 years, male
112.4
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
112.0
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
110.7
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
109.0
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
107.7
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
106.7
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
105.9
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
105.9
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
105.6
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
104.4
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
104.4
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
104.1
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
103.9
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
103.2
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
102.7
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
102.1
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
100.3
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
100.0
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
99.8
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
97.1
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
96.6
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
96.3
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
96.2
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
95.5
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
93.6
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
92.7
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
91.8
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
89.6
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
89.4
GTEX-QLQW-1026-SM-447A9
30-39 years, male
87.9
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
86.2
GTEX-XPT6-1626-SM-4B655
20-29 years, male
85.6
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
84.6
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
82.7
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
81.3
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
81.2
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
80.8
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
80.1
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
80.0
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
79.3
GTEX-X261-2326-SM-4PQYU
50-59 years, male
74.2
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
71.3
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
69.2
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
68.8
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
68.7
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
65.6
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
62.0
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
61.0
GTEX-S33H-0126-SM-4AD62
30-39 years, male
59.8
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
57.1
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
55.9
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
51.9
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
49.5
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
47.3
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
46.2
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
42.7
GTEX-RN64-2326-SM-48FDW
50-59 years, male
42.5
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
42.2
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
37.3
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.