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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1906.0
Min RPKM: 723.4
Std RPKM: 235.8
Median RPKM: 1094.1
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
1906.0
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
1648.3
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
1642.9
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
1585.7
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
1578.9
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
1523.3
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
1510.0
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
1503.7
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
1495.2
GTEX-RU72-2226-SM-46MUE
50-59 years, female
1482.8
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
1466.1
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
1437.5
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
1419.9
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
1406.7
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
1390.9
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
1383.1
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
1381.4
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
1376.1
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
1348.5
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
1315.2
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
1311.9
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
1305.7
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
1283.0
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
1266.7
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
1260.1
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
1254.2
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
1248.7
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
1235.3
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
1209.0
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
1204.0
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
1202.3
GTEX-S32W-1226-SM-4AD67
50-59 years, female
1195.6
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
1184.2
GTEX-P78B-1926-SM-3P616
40-49 years, female
1177.0
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
1167.9
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
1160.4
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
1154.2
GTEX-11I78-1926-SM-59878
50-59 years, female
1150.5
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
1145.7
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
1128.6
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
1122.1
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
1118.0
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
1116.1
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
1115.0
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
1101.6
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
1100.4
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
1097.4
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
1097.0
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
1094.1
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
1092.5
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
1085.8
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
1085.4
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
1084.9
GTEX-S341-0726-SM-4AD5R
40-49 years, female
1083.7
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
1081.7
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
1071.6
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
1070.0
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
1062.0
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
1061.2
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
1058.8
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
1053.2
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
1039.7
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
1028.7
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
1021.7
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
1016.1
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
1002.8
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
991.4
GTEX-QCQG-1426-SM-48U22
50-59 years, female
982.3
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
977.4
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
974.6
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
970.8
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
957.4
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
952.7
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
950.6
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
940.5
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
939.7
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
928.7
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
917.3
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
914.6
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
905.6
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
896.2
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
891.2
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
880.2
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
879.5
GTEX-Q734-0726-SM-48TZP
40-49 years, female
877.9
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
863.1
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
856.2
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
842.3
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
817.0
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
806.4
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
782.4
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
780.1
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
777.6
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
771.9
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
761.2
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
725.4
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
723.4
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.