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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 4933.6
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 4260.5
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 7071.2
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1223.4
Min RPKM: 305.4
Std RPKM: 151.8
Median RPKM: 563.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
1223.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
1092.4
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
1082.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
1014.3
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
1006.3
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
961.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
938.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
934.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
883.1
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
878.9
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
861.0
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
850.6
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
850.0
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
845.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
841.4
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
833.0
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
828.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
827.2
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
826.0
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
824.8
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
809.4
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
795.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
786.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
770.6
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
766.4
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
765.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
765.4
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
751.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
743.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
728.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
718.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
715.5
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
711.0
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
709.2
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
701.8
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
697.6
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
695.2
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
694.2
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
690.6
GTEX-13113-1726-SM-5GCOO
60-69 years, female
686.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
676.7
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
672.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
670.8
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
668.9
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
666.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
663.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
662.9
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
661.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
660.0
GTEX-14753-2426-SM-5LU8U
60-69 years, male
659.3
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
658.5
GTEX-RU72-0626-SM-46MUI
50-59 years, female
654.4
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
654.0
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
653.2
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
652.8
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
651.9
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
648.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
645.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
644.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
644.0
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
643.5
GTEX-1192X-2326-SM-5987X
50-59 years, male
642.5
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
641.3
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
641.0
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
639.5
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
638.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
635.7
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
634.0
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
628.3
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
627.2
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
627.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
625.5
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
625.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
623.0
GTEX-S341-1526-SM-4AD6K
40-49 years, female
621.0
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
619.9
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
618.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
616.5
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
612.4
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
611.3
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
610.9
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
610.8
GTEX-QEL4-2126-SM-447AE
50-59 years, male
608.6
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
608.6
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
608.4
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
607.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
607.7
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
606.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
604.7
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
604.3
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
602.3
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
600.0
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
599.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
599.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
595.1
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
588.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
587.4
GTEX-117YX-1426-SM-5H12H
50-59 years, male
586.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
585.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
581.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
578.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
577.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
571.5
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
570.8
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
567.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
566.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
563.4
GTEX-X261-0626-SM-3NMD9
50-59 years, male
562.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
562.2
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
561.9
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
560.1
GTEX-11P81-1926-SM-5BC53
30-39 years, female
559.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
557.4
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
556.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
556.7
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
555.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
554.3
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
552.1
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
552.1
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
551.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
550.8
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
550.7
GTEX-1122O-1226-SM-5H113
60-69 years, female
548.4
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
544.9
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
543.6
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
543.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
540.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
538.3
GTEX-TML8-1226-SM-32QON
40-49 years, female
536.8
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
535.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
532.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
531.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
530.1
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
528.9
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
527.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
524.8
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
523.1
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
522.8
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
521.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
520.8
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
520.5
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
519.9
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
514.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
511.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
511.2
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
509.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
508.8
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
508.5
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
508.1
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
503.2
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
502.1
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
501.5
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
500.3
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
498.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
498.7
GTEX-111YS-1926-SM-5GICC
60-69 years, male
497.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
495.2
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
494.7
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
494.3
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
492.8
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
489.6
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
482.7
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
481.2
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
477.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
475.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
473.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
470.3
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
469.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
468.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
467.3
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
459.8
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
457.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
456.6
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
454.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
453.5
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
452.9
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
451.3
GTEX-11P82-1326-SM-5HL62
20-29 years, male
446.2
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
440.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
440.2
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
438.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
433.6
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
427.2
GTEX-REY6-2426-SM-48FF5
60-69 years, male
424.3
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
424.1
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
423.1
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
419.5
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
419.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
414.0
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
410.5
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
407.8
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
403.5
GTEX-WFON-1826-SM-3GILG
40-49 years, male
401.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
397.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
396.9
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
395.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
391.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
391.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
391.3
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
391.1
GTEX-117XS-1926-SM-5GICO
60-69 years, male
388.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
386.4
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
383.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
379.7
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
378.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
376.2
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
374.7
GTEX-144GM-0926-SM-5O994
20-29 years, male
366.9
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
362.2
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
352.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
344.7
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
342.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
329.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
305.4
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.