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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 297.1
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 348.7
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 475.5
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 328.7
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 226.3
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 265.1
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 180.5
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 295.5
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 280.6
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 545.3
Min RPKM: 56.7
Std RPKM: 72.1
Median RPKM: 220.9
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
545.3
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
418.1
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
405.1
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
401.1
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
398.6
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
395.0
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
378.0
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
368.0
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
365.8
GTEX-XPT6-1626-SM-4B655
20-29 years, male
363.7
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
355.2
GTEX-RN64-2326-SM-48FDW
50-59 years, male
346.0
GTEX-X261-2326-SM-4PQYU
50-59 years, male
341.5
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
338.3
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
337.7
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
335.2
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
334.5
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
333.6
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
327.0
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
324.8
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
319.9
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
318.8
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
311.8
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
311.7
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
308.0
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
306.0
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
300.1
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
299.2
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
297.0
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
296.8
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
294.5
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
294.1
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
290.0
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
289.7
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
286.4
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
283.1
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
283.0
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
282.1
GTEX-12696-0226-SM-5EGL3
60-69 years, male
280.9
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
278.4
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
277.6
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
277.1
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
274.0
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
272.8
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
269.1
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
268.0
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
266.0
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
263.2
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
262.5
GTEX-S33H-0126-SM-4AD62
30-39 years, male
258.8
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
257.6
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
252.8
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
251.3
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
251.0
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
250.9
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
249.1
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
248.5
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
246.8
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
245.9
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
244.9
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
243.7
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
243.6
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
242.6
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
241.7
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
239.2
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
238.6
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
236.5
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
236.2
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
235.0
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
234.7
GTEX-QLQW-1026-SM-447A9
30-39 years, male
231.8
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
229.6
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
229.2
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
227.5
GTEX-R55D-0126-SM-48FEL
50-59 years, male
227.5
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
226.6
GTEX-R55C-1426-SM-48FED
40-49 years, male
226.4
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
225.9
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
225.4
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
225.1
GTEX-11OF3-1826-SM-5987N
60-69 years, male
224.5
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
224.4
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
223.5
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
222.3
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
221.9
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
221.1
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
220.7
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
217.7
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
217.3
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
216.2
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
216.1
GTEX-V955-1926-SM-4KL1L
60-69 years, male
216.1
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
215.9
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
215.8
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
214.0
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
211.8
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
211.1
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
211.1
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
211.0
GTEX-13111-1526-SM-5EGJX
50-59 years, male
210.4
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
209.5
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
208.8
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
208.7
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
208.4
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
205.2
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
205.1
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
204.3
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
203.2
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
202.7
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
201.9
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
200.6
GTEX-11DXZ-2126-SM-59881
50-59 years, male
198.4
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
196.5
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
193.8
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
193.7
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
193.6
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
192.7
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
192.5
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
190.8
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
190.6
GTEX-S95S-1126-SM-4B64E
60-69 years, male
189.7
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
189.2
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
188.9
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
188.5
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
187.9
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
187.1
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
185.7
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
183.7
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
183.5
GTEX-117XS-2026-SM-5GID1
60-69 years, male
183.4
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
183.1
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
179.1
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
178.4
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
176.5
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
174.6
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
174.3
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
174.2
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
173.3
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
170.8
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
169.4
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
166.5
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
166.5
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
166.4
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
165.7
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
165.2
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
165.1
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
164.2
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
164.0
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
162.8
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
162.5
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
155.7
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
154.1
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
152.3
GTEX-REY6-0126-SM-48FDT
60-69 years, male
152.1
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
150.9
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
150.4
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
149.7
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
148.2
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
145.0
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
142.8
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
142.7
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
138.8
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
132.8
GTEX-13112-0226-SM-5P9IV
50-59 years, male
132.5
GTEX-Y111-2426-SM-4TT23
50-59 years, male
132.5
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
129.1
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
117.2
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
113.4
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
102.6
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
100.3
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
98.3
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
56.7
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.