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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 278.9
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 232.6
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 129.6
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 339.9
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 228
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 258.1
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 378.2
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 359.1
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 373
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 412.0
Min RPKM: 46.9
Std RPKM: 67.5
Median RPKM: 205.3
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
412.0
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
391.5
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
383.4
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
337.0
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
334.3
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
329.4
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
320.6
GTEX-117XS-2026-SM-5GID1
60-69 years, male
316.4
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
315.8
GTEX-Y111-2426-SM-4TT23
50-59 years, male
314.5
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
311.5
GTEX-REY6-0126-SM-48FDT
60-69 years, male
302.2
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
302.1
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
300.4
GTEX-R55D-0126-SM-48FEL
50-59 years, male
300.4
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
298.9
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
296.7
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
296.7
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
296.4
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
289.4
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
286.3
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
286.0
GTEX-12696-0226-SM-5EGL3
60-69 years, male
283.3
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
278.9
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
278.1
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
277.6
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
277.5
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
276.3
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
275.0
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
273.7
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
273.0
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
272.8
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
271.3
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
269.6
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
267.0
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
266.8
GTEX-11OF3-1826-SM-5987N
60-69 years, male
266.5
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
262.4
GTEX-11DXZ-2126-SM-59881
50-59 years, male
259.9
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
259.6
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
258.2
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
250.3
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
248.5
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
248.0
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
243.7
GTEX-13111-1526-SM-5EGJX
50-59 years, male
241.6
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
240.1
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
239.5
GTEX-13112-0226-SM-5P9IV
50-59 years, male
238.5
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
238.3
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
236.0
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
234.9
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
234.6
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
234.4
GTEX-S95S-1126-SM-4B64E
60-69 years, male
231.6
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
231.1
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
230.8
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
227.9
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
227.1
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
226.4
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
224.1
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
223.9
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
223.9
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
223.1
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
222.8
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
221.9
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
220.6
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
220.2
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
219.7
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
219.5
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
219.4
GTEX-V955-1926-SM-4KL1L
60-69 years, male
219.3
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
218.7
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
215.8
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
215.8
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
215.6
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
213.7
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
213.3
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
211.3
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
209.5
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
208.6
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
207.6
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
207.4
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
206.6
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
206.3
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
205.4
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
205.1
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
204.4
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
203.9
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
203.9
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
203.0
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
203.0
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
201.1
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
200.6
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
200.1
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
199.5
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
198.7
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
197.8
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
196.8
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
195.9
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
190.0
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
188.9
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
188.6
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
186.3
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
185.9
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
185.1
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
180.2
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
178.6
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
175.7
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
175.6
GTEX-QLQW-1026-SM-447A9
30-39 years, male
175.6
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
173.5
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
172.4
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
171.4
GTEX-R55C-1426-SM-48FED
40-49 years, male
171.3
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
169.6
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
169.1
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
167.2
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
165.6
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
165.6
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
165.1
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
164.6
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
162.6
GTEX-X261-2326-SM-4PQYU
50-59 years, male
161.7
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
161.6
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
161.1
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
160.7
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
160.4
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
159.3
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
159.3
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
159.2
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
158.6
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
153.7
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
152.3
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
149.9
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
148.9
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
148.3
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
145.8
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
144.3
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
142.2
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
140.7
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
140.0
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
139.9
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
139.1
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
137.1
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
134.9
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
132.4
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
128.0
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
126.9
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
126.7
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
126.3
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
122.2
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
118.1
GTEX-XPT6-1626-SM-4B655
20-29 years, male
117.5
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
117.3
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
116.5
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
113.1
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
109.0
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
108.6
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
105.4
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
104.2
GTEX-RN64-2326-SM-48FDW
50-59 years, male
104.0
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
102.8
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
101.9
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
100.8
GTEX-S33H-0126-SM-4AD62
30-39 years, male
100.7
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
98.1
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
87.3
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
84.9
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
66.9
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
57.2
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
46.9
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.