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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 381.1
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 447.9
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 452.8
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 293.8
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 346.9
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 367.2
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 344.5
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 239
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 412.2
Min RPKM: 13.1
Std RPKM: 72.5
Median RPKM: 83.9
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
412.2
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
384.0
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
300.9
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
262.0
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
261.1
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
254.7
GTEX-11GSP-0626-SM-5986T
60-69 years, female
229.6
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
226.1
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
225.2
GTEX-1399T-0826-SM-5IFES
60-69 years, male
217.4
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
216.1
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
215.3
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
208.0
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
206.0
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
201.2
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
178.5
GTEX-YECK-1926-SM-4W21H
60-69 years, male
174.4
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
172.0
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
168.2
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
153.3
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
151.8
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
150.2
GTEX-13112-1426-SM-5EGH8
50-59 years, male
149.2
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
148.2
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
143.3
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
142.7
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
142.4
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
127.0
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
126.7
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
123.7
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
123.3
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
121.6
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
121.3
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
117.3
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
116.9
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
116.9
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
116.0
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
107.2
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
106.7
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
106.5
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
105.4
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
101.5
GTEX-RU72-1426-SM-46MUF
50-59 years, female
101.0
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
100.1
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
99.5
GTEX-S33H-1626-SM-4AD68
30-39 years, male
99.0
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
96.4
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
96.3
GTEX-QEL4-1226-SM-447A4
50-59 years, male
96.1
GTEX-RN64-1826-SM-48FDV
50-59 years, male
95.4
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
94.5
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
93.8
GTEX-REY6-1226-SM-48FDR
60-69 years, male
93.8
GTEX-X261-1726-SM-4PQYT
50-59 years, male
89.9
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
89.2
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
88.9
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
86.7
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
86.0
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
84.5
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
83.9
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
83.4
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
83.2
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
81.8
GTEX-Q734-0326-SM-48U15
40-49 years, female
80.3
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
79.7
GTEX-R53T-0326-SM-48FEC
50-59 years, female
78.5
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
77.1
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
77.1
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
76.6
GTEX-QESD-2026-SM-447BI
20-29 years, male
75.0
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
74.3
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
71.7
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
70.3
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
69.2
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
67.6
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
65.6
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
65.4
GTEX-11ZUS-2526-SM-59872
30-39 years, male
62.5
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
62.0
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
61.4
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
60.2
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
59.5
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
59.3
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
59.2
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
58.2
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
57.6
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
55.7
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
55.6
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
54.3
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
52.7
GTEX-12696-0826-SM-5EGGE
60-69 years, male
49.2
GTEX-P78B-1326-SM-3P611
40-49 years, female
46.7
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
45.4
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
45.3
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
44.8
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
43.5
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
41.8
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
41.4
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
40.8
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
40.6
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
40.6
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
36.8
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
36.5
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
35.9
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
34.5
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
33.7
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
32.4
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
32.0
GTEX-13113-1326-SM-5GCOI
60-69 years, female
31.7
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
31.6
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
30.6
GTEX-S32W-1926-SM-4AD63
50-59 years, female
29.9
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
27.0
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
23.1
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
21.4
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
20.6
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
15.0
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
13.5
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
13.1
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
