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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 276.1
Min RPKM: 153.7
Std RPKM: 26.2
Median RPKM: 200.4
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
276.1
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
272.1
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
268.9
GTEX-R55G-0226-SM-48FEI
40-49 years, female
268.3
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
265.8
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
252.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
242.8
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
242.7
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
241.2
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
240.5
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
240.2
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
237.1
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
235.2
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
234.7
GTEX-144GN-2126-SM-5O99D
50-59 years, male
233.9
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
231.3
GTEX-QCQG-0226-SM-48U28
50-59 years, female
231.2
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
228.7
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
228.3
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
225.3
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
225.1
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
224.4
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
224.0
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
223.5
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
221.9
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
220.7
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
220.1
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
219.9
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
218.8
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
218.7
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
216.7
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
216.5
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
215.7
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
214.7
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
214.7
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
213.5
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
213.0
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
209.7
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
208.5
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
207.4
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
204.5
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
204.4
GTEX-QV31-0126-SM-447BP
30-39 years, male
204.3
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
203.8
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
203.7
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
203.2
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
203.1
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
202.7
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
202.7
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
202.6
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
201.6
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
201.4
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
199.4
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
198.9
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
198.7
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
197.0
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
196.8
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
196.1
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
195.4
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
194.7
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
193.6
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
193.5
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
192.9
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
192.9
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
192.4
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
191.6
GTEX-X585-1826-SM-4QAS3
50-59 years, male
190.8
GTEX-QLQW-0126-SM-447BK
30-39 years, male
190.5
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
190.4
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
190.1
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
189.6
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
189.6
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
186.9
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
186.6
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
185.7
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
185.3
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
185.3
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
185.2
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
185.2
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
185.0
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
184.7
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
183.8
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
183.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
182.6
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
182.3
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
180.8
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
179.7
GTEX-PX3G-0926-SM-48U12
20-29 years, female
179.1
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
179.0
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
178.5
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
178.0
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
177.8
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
177.2
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
176.6
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
174.8
GTEX-13111-0126-SM-5EGHO
50-59 years, male
171.0
GTEX-Q734-0226-SM-48U1A
40-49 years, female
169.9
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
169.6
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
165.4
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
162.5
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
160.9
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
160.4
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
154.7
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
153.7
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.