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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 868.7
Min RPKM: 311.4
Std RPKM: 106.7
Median RPKM: 474.3
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
868.7
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
772.4
GTEX-RU72-2226-SM-46MUE
50-59 years, female
728.9
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
714.5
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
710.2
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
683.4
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
679.1
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
675.7
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
671.3
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
664.5
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
648.2
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
645.9
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
641.6
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
640.8
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
628.6
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
613.2
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
601.0
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
601.0
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
598.9
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
595.1
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
587.5
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
555.9
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
552.2
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
545.5
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
537.1
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
534.0
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
532.4
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
531.2
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
514.7
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
511.4
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
511.0
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
507.2
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
506.8
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
506.6
GTEX-S32W-1226-SM-4AD67
50-59 years, female
502.4
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
502.4
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
498.4
GTEX-P78B-1926-SM-3P616
40-49 years, female
497.5
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
497.0
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
495.8
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
493.4
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
491.9
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
489.9
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
487.1
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
483.9
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
482.8
GTEX-11I78-1926-SM-59878
50-59 years, female
481.2
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
479.4
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
474.3
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
468.7
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
467.5
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
465.6
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
460.2
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
455.1
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
452.9
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
446.0
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
444.5
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
444.2
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
442.6
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
441.7
GTEX-S341-0726-SM-4AD5R
40-49 years, female
440.5
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
435.6
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
433.6
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
432.9
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
427.3
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
424.8
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
424.0
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
422.7
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
418.9
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
418.2
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
417.5
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
417.0
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
412.7
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
412.1
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
411.3
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
409.7
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
407.7
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
406.8
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
405.1
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
403.6
GTEX-QCQG-1426-SM-48U22
50-59 years, female
403.0
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
398.7
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
397.5
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
395.3
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
394.9
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
394.8
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
392.4
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
391.4
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
389.3
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
384.9
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
376.1
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
369.1
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
368.9
GTEX-Q734-0726-SM-48TZP
40-49 years, female
359.9
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
340.0
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
337.7
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
311.4
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.