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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 83.0
Min RPKM: 32.3
Std RPKM: 10.7
Median RPKM: 52.1
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
83.0
GTEX-13113-1526-SM-5EGHV
60-69 years, female
76.6
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
76.5
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
74.5
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
73.4
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
70.3
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
67.7
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
66.2
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
64.9
GTEX-11P82-0926-SM-5986X
20-29 years, male
63.5
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
63.1
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
62.4
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
62.1
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
61.6
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
60.7
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
59.6
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
59.3
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
58.7
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
57.8
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
57.1
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
55.5
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
55.0
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
53.9
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
53.4
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
53.4
GTEX-1445S-2926-SM-5O993
60-69 years, male
53.3
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
52.7
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
52.5
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
52.1
GTEX-X261-2426-SM-4PQZU
50-59 years, male
52.1
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
51.2
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
51.1
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
50.8
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
50.7
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
50.3
GTEX-13O21-1926-SM-5MR39
50-59 years, male
50.3
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
50.3
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
50.2
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
50.0
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
49.9
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
49.9
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
49.6
GTEX-Y111-2626-SM-4TT24
50-59 years, male
48.5
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
47.8
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
47.1
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
46.0
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
45.9
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
45.1
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
43.9
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
43.4
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
41.4
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
41.0
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
38.9
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
36.7
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
36.5
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
35.0
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
32.3
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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