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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 183.0
Min RPKM: 3.6
Std RPKM: 43.6
Median RPKM: 47.1
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
183.0
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
157.2
GTEX-1445S-2926-SM-5O993
60-69 years, male
157.0
GTEX-13113-1526-SM-5EGHV
60-69 years, female
153.1
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
148.0
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
112.6
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
108.0
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
100.0
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
98.3
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
98.0
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
92.9
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
92.8
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
85.4
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
81.1
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
80.0
GTEX-Y111-2626-SM-4TT24
50-59 years, male
76.4
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
72.6
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
68.2
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
66.5
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
63.7
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
63.6
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
58.8
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
57.6
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
57.5
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
56.9
GTEX-13O21-1926-SM-5MR39
50-59 years, male
55.6
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
52.2
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
52.1
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
47.1
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
45.8
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
42.5
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
40.6
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
39.4
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
33.4
GTEX-11P82-0926-SM-5986X
20-29 years, male
32.4
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
31.1
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
29.7
GTEX-X261-2426-SM-4PQZU
50-59 years, male
28.3
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
26.5
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
23.7
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
23.1
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
21.0
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
20.6
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
18.1
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
18.0
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
18.0
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
18.0
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
17.5
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
17.2
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
16.6
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
8.1
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
7.3
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
7.2
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
7.1
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
7.0
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
4.8
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
3.6
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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