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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 456
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 256.1
Min RPKM: 43.4
Std RPKM: 45.4
Median RPKM: 152.9
GTEX-WL46-2926-SM-3LK82
50-59 years, male
256.1
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
222.4
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
214.8
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
214.7
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
214.3
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
212.9
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
209.9
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
209.4
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
208.6
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
206.6
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
206.6
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
198.4
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
197.1
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
196.1
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
196.0
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
195.9
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
193.7
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
192.1
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
188.4
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
187.5
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
187.0
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
186.1
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
185.2
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
184.8
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
184.5
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
183.9
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
183.0
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
182.7
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
181.5
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
180.8
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
178.9
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
177.7
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
177.2
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
175.2
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
174.9
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
174.3
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
173.6
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
172.8
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
171.9
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
170.5
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
170.4
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
169.0
GTEX-11PRG-2926-SM-5987A
50-59 years, male
168.8
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
166.1
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
165.1
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
162.6
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
162.4
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
159.8
GTEX-X585-3026-SM-46MWF
50-59 years, male
159.2
GTEX-145MF-2726-SM-5O995
50-59 years, male
158.7
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
158.1
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
156.4
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
155.4
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
154.9
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
154.5
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
153.6
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
153.3
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
152.6
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
152.1
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
149.3
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
149.2
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
148.4
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
146.5
GTEX-1128S-2726-SM-5H12C
60-69 years, female
142.2
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
141.6
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
141.1
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
140.2
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
139.2
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
138.6
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
137.5
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
137.1
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
135.4
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
129.9
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
128.2
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
126.0
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
125.6
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
122.8
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
122.7
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
122.6
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
120.5
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
119.0
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
118.9
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
117.9
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
115.7
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
115.5
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
114.4
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
107.1
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
105.1
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
105.0
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
104.8
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
103.7
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
101.7
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
97.4
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
95.5
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
93.1
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
92.0
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
90.3
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
88.7
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
88.1
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
85.9
GTEX-144FL-3026-SM-5O99C
50-59 years, male
82.5
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
80.5
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
80.3
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
77.6
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
77.4
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
76.0
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
74.3
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
73.3
GTEX-11GSP-3226-SM-5986O
60-69 years, female
63.6
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
60.4
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
54.9
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
54.5
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
46.3
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
43.4
Show all
Brain - Frontal Cortex (BA9) RPKM: 177.7
Samples: 108
Max RPKM: 292.7
Min RPKM: 31.3
Std RPKM: 65.6
Median RPKM: 187.1
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
292.7
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
287.4
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
275.3
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
267.5
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
266.3
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
263.8
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
262.8
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
262.5
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
260.7
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
260.6
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
259.4
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
257.9
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
254.9
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
251.7
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
251.2
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
249.9
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
249.7
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
246.8
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
246.3
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
241.1
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
239.4
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
239.2
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
232.9
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
232.7
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
230.5
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
230.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
226.8
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
226.4
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
225.9
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
225.9
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
224.8
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
222.9
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
222.4
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
221.9
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
221.3
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
220.9
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
220.4
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
219.4
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
216.9
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
213.0
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
213.0
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
209.7
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
209.2
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
205.9
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
202.2
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
201.1
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
199.2
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
198.2
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
196.2
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
194.6
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
192.9
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
192.5
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
192.3
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
187.7
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
186.6
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
186.4
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
186.1
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
183.1
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
181.7
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
175.0
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
173.8
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
173.3
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
173.1
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
167.8
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
165.9
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
164.3
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
163.0
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
162.8
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
162.7
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
159.8
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
159.8
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
156.3
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
153.2
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
150.9
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
150.0
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
149.0
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
148.8
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
146.2
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
135.6
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
134.8
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
134.1
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
132.1
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
131.0
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
130.6
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
121.1
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
117.0
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
111.9
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
108.8
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
108.3
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
108.3
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
104.2
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
99.6
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
94.0
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
92.3
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
84.9
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
74.0
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
68.9
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
68.1
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
66.8
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
66.5
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
64.3
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
63.2
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
55.3
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
54.1
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
52.3
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
41.0
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
36.3
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
31.3
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.