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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 23.1
Min RPKM: 0.0
Std RPKM: 6.3
Median RPKM: 9.4
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
23.1
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
22.7
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
22.1
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
21.1
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
19.3
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
18.2
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
18.2
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
18.0
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
18.0
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
17.2
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
16.9
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
16.5
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
16.3
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
15.7
GTEX-1122O-1326-SM-5H11F
60-69 years, female
15.5
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
15.5
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
15.4
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
15.3
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
15.1
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
14.9
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
14.8
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
14.6
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
14.1
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
14.1
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
13.9
GTEX-111YS-1426-SM-5GID8
60-69 years, male
13.5
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
13.5
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
13.5
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
13.4
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
13.4
GTEX-13113-1226-SM-5EGHT
60-69 years, female
13.3
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
13.0
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
13.0
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
12.9
GTEX-ZTSS-0926-SM-59865
40-49 years, male
12.5
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
12.2
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
11.9
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
11.5
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
11.2
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
10.8
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
10.8
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
10.4
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
10.3
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
9.6
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
9.2
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
9.2
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
8.6
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
8.3
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
7.9
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
7.7
GTEX-13O61-1326-SM-5KM31
60-69 years, male
7.6
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
7.5
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
7.4
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
6.9
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
6.8
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
6.7
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
6.2
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
6.1
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
5.7
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
5.7
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
5.3
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
5.0
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
5.0
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
4.8
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
4.1
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
4.0
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
4.0
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
3.9
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
3.5
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
2.8
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
2.3
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
2.3
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
2.3
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
2.0
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
2.0
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
1.1
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
0.9
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
0.7
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
0.6
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
0.6
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
0.4
GTEX-13111-1426-SM-5DUW3
50-59 years, male
0.3
GTEX-117YX-0326-SM-5GICL
50-59 years, male
0.2
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
0.2
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
0.1
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
0.1
GTEX-1192X-2526-SM-59868
50-59 years, male
0.0
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
0.0
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SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 85
