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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 13.9
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 13.8
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 4.4
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 14
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 24.1
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 24.8
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 13.5
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 12.3
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 114.3
Min RPKM: 1.9
Std RPKM: 19.8
Median RPKM: 19.1
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
114.3
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
78.2
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
76.0
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
64.6
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
63.2
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
62.3
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
62.0
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
54.1
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
53.8
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
53.5
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
52.0
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
51.7
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
51.4
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
51.2
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
50.2
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
48.3
GTEX-QESD-2026-SM-447BI
20-29 years, male
48.2
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
48.0
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
43.9
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
43.3
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
42.2
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
40.4
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
40.0
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
39.8
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
39.4
GTEX-REY6-1226-SM-48FDR
60-69 years, male
39.2
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
38.1
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
37.3
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
34.9
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
34.8
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
32.4
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
32.0
GTEX-13113-1326-SM-5GCOI
60-69 years, female
30.6
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
30.3
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
30.0
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
28.7
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
28.3
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
28.0
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
27.8
GTEX-QEL4-1226-SM-447A4
50-59 years, male
27.5
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
27.3
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
26.8
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
26.4
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
25.2
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
24.9
GTEX-S32W-1926-SM-4AD63
50-59 years, female
24.3
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
24.0
GTEX-11GSP-0626-SM-5986T
60-69 years, female
23.7
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
23.4
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
22.3
GTEX-12696-0826-SM-5EGGE
60-69 years, male
21.2
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
20.9
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
20.8
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
20.7
GTEX-YECK-1926-SM-4W21H
60-69 years, male
20.6
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
19.7
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
19.7
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
19.5
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
19.4
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
19.1
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
18.4
GTEX-RU72-1426-SM-46MUF
50-59 years, female
18.3
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
18.1
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
18.0
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
16.3
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
15.4
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
15.4
GTEX-S33H-1626-SM-4AD68
30-39 years, male
15.2
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
15.1
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
14.1
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
13.8
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
13.6
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
13.3
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
13.3
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
13.2
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
13.1
GTEX-13112-1426-SM-5EGH8
50-59 years, male
12.5
GTEX-X261-1726-SM-4PQYT
50-59 years, male
11.1
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
11.0
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
10.9
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
10.6
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
9.7
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
8.6
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
8.6
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
8.6
GTEX-R53T-0326-SM-48FEC
50-59 years, female
8.4
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
8.4
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
8.1
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
8.0
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
8.0
GTEX-Q734-0326-SM-48U15
40-49 years, female
7.9
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
7.1
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
7.0
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
6.4
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
6.4
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
5.7
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
5.7
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
5.5
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
5.4
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
5.0
GTEX-P78B-1326-SM-3P611
40-49 years, female
5.0
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
4.7
GTEX-1399T-0826-SM-5IFES
60-69 years, male
4.7
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
4.6
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
4.4
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
4.3
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
4.0
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
3.7
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
3.7
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
3.6
GTEX-RN64-1826-SM-48FDV
50-59 years, male
3.5
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
3.5
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
2.8
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
2.8
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
2.7
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
2.6
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
2.5
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
2.5
GTEX-11ZUS-2526-SM-59872
30-39 years, male
1.9
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
